Gene BBta_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3005 
Symbol 
ID5152801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3142039 
End bp3142818 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID640557879 
Productshort chain enoyl-CoA hydratase 
Protein accessionYP_001239033 
Protein GI148254448 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.717917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTT ACGAGCACAT CATCGTCGAA GGCAAAGGCG CGGTCGGGGT CATTACCTTG 
AACAGGCCCA AGATGCTCAA TGCGCTGTCA TTCGGCGTTT TCCGCGAGAT TGCCGCGGCC
GTCGACGACC TCGAGGCCGA CGACGCCATC GGCTGCATCG TGATCACCGG CAGTGAGAAG
GCTTTTGCCG CCGGCGCCGA CATCAAGGAG ATGCAGCCCA AGAGCTTCAT CGACATGTTC
TCGAGCGACT TCACCGCGAT TGGCGGCGAC CGGGTCGCGC GCTGCCGCAA GCCGACCATC
GCGGCGGTGG CCGGCTACGC CCTCGGCGGC GGCTGTGAGC TCGCGATGAT GTGCGACTTC
ATCATCGCGG CCGACACCGC GAAATTCGGC CAGCCGGAAA TCACGCTCGG CACCATCCCC
GGCATCGGCG GTACCCAGCG CCTGACGCGC GCCATCGGCA AGGCCAAGGC GATGGACCTC
TGCCTGACCG GCCGCATGAT GGATGCGGCG GAAGCGGAGC GCTCCGGCCT CGTCAGCCGC
GTCGTGGCGG CGGACCGGCT GATGGAAGAG ACGATGGCCG CGGCCGAGAA GATCGCGTCG
ATGTCGCGCC CGGCGGCGGC CATGGCCAAG GAAGCCGTGA ACCGCGCCTT CGAAACTCCG
CTCTCGGAAG GCATGAATGT CGAGCGCAAC CTGTTTCACG CTACCTTCGC GCTCGAGGAT
CGCGCCGAAG GCATGGCCGC GTTCATCGAG AAGCGCAAGC CGGTCAACAA GAACCGCTGA
 
Protein sequence
MSVYEHIIVE GKGAVGVITL NRPKMLNALS FGVFREIAAA VDDLEADDAI GCIVITGSEK 
AFAAGADIKE MQPKSFIDMF SSDFTAIGGD RVARCRKPTI AAVAGYALGG GCELAMMCDF
IIAADTAKFG QPEITLGTIP GIGGTQRLTR AIGKAKAMDL CLTGRMMDAA EAERSGLVSR
VVAADRLMEE TMAAAEKIAS MSRPAAAMAK EAVNRAFETP LSEGMNVERN LFHATFALED
RAEGMAAFIE KRKPVNKNR