Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3005 |
Symbol | |
ID | 5152801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3142039 |
End bp | 3142818 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640557879 |
Product | short chain enoyl-CoA hydratase |
Protein accession | YP_001239033 |
Protein GI | 148254448 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.717917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTTT ACGAGCACAT CATCGTCGAA GGCAAAGGCG CGGTCGGGGT CATTACCTTG AACAGGCCCA AGATGCTCAA TGCGCTGTCA TTCGGCGTTT TCCGCGAGAT TGCCGCGGCC GTCGACGACC TCGAGGCCGA CGACGCCATC GGCTGCATCG TGATCACCGG CAGTGAGAAG GCTTTTGCCG CCGGCGCCGA CATCAAGGAG ATGCAGCCCA AGAGCTTCAT CGACATGTTC TCGAGCGACT TCACCGCGAT TGGCGGCGAC CGGGTCGCGC GCTGCCGCAA GCCGACCATC GCGGCGGTGG CCGGCTACGC CCTCGGCGGC GGCTGTGAGC TCGCGATGAT GTGCGACTTC ATCATCGCGG CCGACACCGC GAAATTCGGC CAGCCGGAAA TCACGCTCGG CACCATCCCC GGCATCGGCG GTACCCAGCG CCTGACGCGC GCCATCGGCA AGGCCAAGGC GATGGACCTC TGCCTGACCG GCCGCATGAT GGATGCGGCG GAAGCGGAGC GCTCCGGCCT CGTCAGCCGC GTCGTGGCGG CGGACCGGCT GATGGAAGAG ACGATGGCCG CGGCCGAGAA GATCGCGTCG ATGTCGCGCC CGGCGGCGGC CATGGCCAAG GAAGCCGTGA ACCGCGCCTT CGAAACTCCG CTCTCGGAAG GCATGAATGT CGAGCGCAAC CTGTTTCACG CTACCTTCGC GCTCGAGGAT CGCGCCGAAG GCATGGCCGC GTTCATCGAG AAGCGCAAGC CGGTCAACAA GAACCGCTGA
|
Protein sequence | MSVYEHIIVE GKGAVGVITL NRPKMLNALS FGVFREIAAA VDDLEADDAI GCIVITGSEK AFAAGADIKE MQPKSFIDMF SSDFTAIGGD RVARCRKPTI AAVAGYALGG GCELAMMCDF IIAADTAKFG QPEITLGTIP GIGGTQRLTR AIGKAKAMDL CLTGRMMDAA EAERSGLVSR VVAADRLMEE TMAAAEKIAS MSRPAAAMAK EAVNRAFETP LSEGMNVERN LFHATFALED RAEGMAAFIE KRKPVNKNR
|
| |