Gene BBta_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2998 
Symbol 
ID5153525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3132356 
End bp3133435 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content65% 
IMG OID640557873 
Producthypothetical protein 
Protein accessionYP_001239027 
Protein GI148254442 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCT TCGAAGATCG AGTTCTTCTG GTCCTGCTCG TCGCGATCAC GCTGACGCTC 
GGCTGGATCC TGCTGCCGTT CTACGGAGCC GTGCTGTGGG GCCTCGTCGG CGCAGTCGTC
TTCGCTCCGC TTCACCGCCG ACTGGCGCGA TCGATGCACG GCCGAGATGG CCTCGCTGCC
GCCGTGGTGG TGCTGCTCGT CGTCCTGATC GTGATCATTC CGCTGTCGCT GATCGGGGCG
GCGCTGGCGC AGCAGGCGAC CGGTGTCTAC GCACAGGCGC AGTCCGGCCA GCTGGATATC
GGGCAGTACT TTCAGAAGAT GATGGAGGCG CTGCCCACCT GGGTGGTCGA CCTGCTCAAC
AGGTTCGGTC TCGGCAGCCT GGCCGGGCTG AAGGACAGGC TGTCCGCCGT GCTGCTGCGC
GGCAGCCAGA TGATCGCAGG TCAGGCCCTC AACATCGGCC AGGGAACCTT CGAGTTCTTC
GTCAACCTGT TCCTCATGCT GTATCTGCTG TTCTTCCTGC TTCGCGACCA GGACGCATTG
TCGGAGCGCA TCGCGACCGC CATTCCGCTG CGGACCGAGC AACGCAATGC ACTGCTGCAC
AAGTTCACGG TCGTCATCCG CGCGACCGTG AAGGGCAATC TGGTCGTGGC GCTGGCGCAG
GGCGCGCTGG GCGGTCTGAT CTTCTGGTTC CTCGGCATCA CCGCGCCGCT GCTATGGGCC
GTCGTGATGG CGTTCCTCTC ACTGCTTCCG GCGGTCGGAG CAGGGCTGGT GTGGTTTCCG
GTCGCGCTCT ATCTGCTGGC CACCGGAGCG ATCTGGCATG GTGTGATCCT GATCGCCTAT
GGCGCGCTGG TCATTGGCCT CGTCGACAAT CTGCTGCGTC CCATCCTCGT CGGCCAGGAC
ACCAAGATGC CTGATTATGT CGTGCTGATC TCGACCCTGG GCGGGATCGA GGCGTTCGGC
CTCAACGGCT TCATCATCGG CCCGGCGATG GCGGCGATGT TCATCGCGAT CTGGAGCATG
TTCTCCGACG CACGACGCGA CGGGGCGTTC GTGCAGGAGA CCCCGCCCGG GCCGGGATGA
 
Protein sequence
MRSFEDRVLL VLLVAITLTL GWILLPFYGA VLWGLVGAVV FAPLHRRLAR SMHGRDGLAA 
AVVVLLVVLI VIIPLSLIGA ALAQQATGVY AQAQSGQLDI GQYFQKMMEA LPTWVVDLLN
RFGLGSLAGL KDRLSAVLLR GSQMIAGQAL NIGQGTFEFF VNLFLMLYLL FFLLRDQDAL
SERIATAIPL RTEQRNALLH KFTVVIRATV KGNLVVALAQ GALGGLIFWF LGITAPLLWA
VVMAFLSLLP AVGAGLVWFP VALYLLATGA IWHGVILIAY GALVIGLVDN LLRPILVGQD
TKMPDYVVLI STLGGIEAFG LNGFIIGPAM AAMFIAIWSM FSDARRDGAF VQETPPGPG