| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2948 |
|---|
| Symbol | |
|---|
| ID | 5155523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3069063 |
|---|
| End bp | 3071597 |
|---|
| Gene Length | 2535 bp |
|---|
| Protein Length | 844 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640557827 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238981 |
|---|
| Protein GI | 148254396 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.139026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCC CGAGCGGCAA GGACCAGGGA GCGCGACCCG CCGGTCAGCC CGGGACCGCC
CGCCGGGTCC TGCGCCGGGC CACGCAATGG GCGAGCGACT ATGCAAGGCT GCCCGGAATT
CCGGATGAGT TCATCGGTGC CGACGGTCAG CCCCGCCCGG TCTGGAACCG CTTTGCCGAC
ACTTTCGCAG CGCTCGCGCC GACGGATATC GACCGTCGCT TCGCCTCGGC CGACCGCCAT
TTGCGCGAGG CCGGCGTCAC CTACCGCTCG CCGAGCGACA ACGCCGAACG ATCCTGGCCG
CTGAGCCACC TGCCGCTGCT GATCGACGAG GCCGAGTGGG CGCAGCTCTC GCAAGGCATC
GTCCAGCGCG CCGAACTGCT CGAACGTGTG CTGCAGGACA TCTATGGCGA AGGGCGCCTG
ATCGCGAGCG GCGCGCTGCC CGCCGCGGCC GTCGCCGGCT CCAGCGAATA TCTGCGTCCG
GTCTGCGGCA TCAAGCCGCC GGGGGGCCGC TTCCTCAGCA TCTATGCCGC CGATATCGGG
CGCGGCCCTG ACGGACGCTG GTGGGTGCTG AGTGATCGCA CGCAGGCGCC ATCCGGGATG
GGCTATGCGT TGGAGAACCG GCTGGTGCTG TCGCGCGCCT TCTCCTCGAT CTACAAGTCG
ATGAATGTCG AGCGGCTGGC GCCGTTCTTC GAGGCGTTTC GCGACGCGCT GCGAGCCAGC
GCCGATCGCG ACGAGCCGCG CATCGGCCTG CTGACGCCGG GCACCTTCAG CGAGACCTAT
TTCGAGCACG CCACGCTCGC GCGTTATCTC GGCTTCCTGC TGGTGGAGGG CGACGATCTC
GCCGTGAGCG GCGACCGCGT CCATATCCGC ACCGTCGCCG GCCTCAAGCG TGTCGACGTG
CTGCTGCGCA GGCTGGACTC CAACTCGATC GATCCGCTGG AGCTCGATGC CGCCTCGCGG
CTCGGCGTCG CCGGCCTGAT GGACGTCGTG CGCAAAGGCG GCGTCGTGGT CGCGAACATG
CCCGGCTCCG GCGTGCTCGA GGCCCGCGCA TTGCTCGGCT TCCTGCCGAG CCTCTCGCGA
CGTGTGCTGG GCGAGGATCT GAAGATCCCG CACATCGCGA CCTGGTGGTG TGGCCAGAAG
TCGGCGCGCG ACGAGGTGCT GTCGCGGCTG GACGAGTTTG CGATCGAAGG CGCCTATGGC
CGCGCGGTGC CTGGCTTTGC CAATGCCGGC CCGGTGCTCG CCAGCGAACT GCCCGCGGCC
GAACGTGAGC GGCTGCGCAA CGCCATTGCC CAGCGCGGGA TGGAATATGT CGGCCAGGAG
GTGGTGCGGC TGTCGACCAC GCCGGTGTGG CAGGACGGAC GGCTGAAGCC GCGGCCCTTC
GTGCTGCGCG TGTTCGCGGC GGCCACCTCG GAAGGATGGA CGGTGATGCC CGGCGGGTTC
TGCCGCATCG CCGACGAGCC GGACGCCCGT GCGGTGTCGA TGGGCGACGG CGTGCGGGCG
GCGGATGTCT GGGTTCTCGC GGACAAGGCC GTGGCAGCGC GCAGCCTGCT GCCGGGCTCG
GACAATGTCC GGATCCGCCG CATCGCCGGC GTGCTGCCGA GCCGCGCCGC CGACAATCTG
TTCTGGCTCG GCCGCTATCT GGAACGCGCC GAAGCGACGT TGCGGCTGAT CCGGGTGCTC
GCGGCTCAGC ATCGTGATCC CGGCAAGGGT TCGCCCGCCC AGCTCAACAC CGCCGAGCGC
ATTCAGCGCC TGCTGCTGGC CTGGGGCGCG ATCGAGCAGA CGTCGCGCGC GCGCGGATCG
CAGGTCTCCG CGGAGGCGCT GCAGGCGGAG GCGCAGTTCG GCTCGGCGCT GTCCCTGCTG
AGATCGGCGC AGCGCACGGC GACGTCGTTG CGCGAGCGTC TGTCGCCGGA TGCCTGGCAG
GTGATCACCG AGATGCCAGG CAGGTTGGCG CAGGACGCCG AGGACGAAGA TGCCATCGTC
AGCCTCGCCG AACTCACGCT CGAGAAGCTC GCGACCTTCG CCGGCCTCGC CCAGGAGAAC
ATGAACCGCG CCGCGGGCTG GCGCTTCCTC GATATGGGCC GCCGCGCCGA GCGCGCCATC
AACACCGTGC GTTTCGCGCG GCAATTCGGC TATGACGAGG CGACGCCCGA GGATCTCGAT
GTCCTGCTCA CCTTGGTCGA CTGCCAGATC ACCTATCGCT CGCGCTATTT GATCGGCCCG
TCGCTGGCGC CGATCCGCGA TCTCGTCGTG CTCGATCCCT ATAATCCGCG CTCGGTCGCA
TTTCAGATCG AGGTGCTGAA CGAGCACATC GCGAGCCTGC CGGCGCTGAA GGAGAATGGG
CTGATCGAGC GGCCGCAGCG GCTCGCGGTG TCGCTGCAGG CCCGGCTCAC CACCGCCGAG
GCGGCCCATC TCGACGGCCG CGGCCTGTTC GCGCTGGAGC AGGATCTGCT CAACCTGGCG
GAGGCGATCG GCCAGCATTA CTTCCCGCAC GGTCCGAACG CGACCCGGCC GGAAAAGCTG
ACGGGCCTCG CGTGA
|
|---|
| Protein sequence | MDGPSGKDQG ARPAGQPGTA RRVLRRATQW ASDYARLPGI PDEFIGADGQ PRPVWNRFAD
TFAALAPTDI DRRFASADRH LREAGVTYRS PSDNAERSWP LSHLPLLIDE AEWAQLSQGI
VQRAELLERV LQDIYGEGRL IASGALPAAA VAGSSEYLRP VCGIKPPGGR FLSIYAADIG
RGPDGRWWVL SDRTQAPSGM GYALENRLVL SRAFSSIYKS MNVERLAPFF EAFRDALRAS
ADRDEPRIGL LTPGTFSETY FEHATLARYL GFLLVEGDDL AVSGDRVHIR TVAGLKRVDV
LLRRLDSNSI DPLELDAASR LGVAGLMDVV RKGGVVVANM PGSGVLEARA LLGFLPSLSR
RVLGEDLKIP HIATWWCGQK SARDEVLSRL DEFAIEGAYG RAVPGFANAG PVLASELPAA
ERERLRNAIA QRGMEYVGQE VVRLSTTPVW QDGRLKPRPF VLRVFAAATS EGWTVMPGGF
CRIADEPDAR AVSMGDGVRA ADVWVLADKA VAARSLLPGS DNVRIRRIAG VLPSRAADNL
FWLGRYLERA EATLRLIRVL AAQHRDPGKG SPAQLNTAER IQRLLLAWGA IEQTSRARGS
QVSAEALQAE AQFGSALSLL RSAQRTATSL RERLSPDAWQ VITEMPGRLA QDAEDEDAIV
SLAELTLEKL ATFAGLAQEN MNRAAGWRFL DMGRRAERAI NTVRFARQFG YDEATPEDLD
VLLTLVDCQI TYRSRYLIGP SLAPIRDLVV LDPYNPRSVA FQIEVLNEHI ASLPALKENG
LIERPQRLAV SLQARLTTAE AAHLDGRGLF ALEQDLLNLA EAIGQHYFPH GPNATRPEKL
TGLA
|
|---|
| |