Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2939 |
Symbol | |
ID | 5154959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3057769 |
End bp | 3059307 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640557818 |
Product | putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, HpcC-like protein |
Protein accession | YP_001238972 |
Protein GI | 148254387 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.291838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGG CCACACCCAA AGCCGACATC TACAAGGCCA ATCTCGACCG CGCCGCCCCC CTGCTCGCCA AGCTCAAGGA CGAGGGCATC GGCCACTTCA TCGATGGCAA GGTGGTACCG GCGATTTCGG GCGCGACGTT CGAGACGAAG TCGCCAATCG ACAACACCGT GCTGGCCAAA GTAGCGCGCG GCAATGCCGA GGACATCGAC CGCGCGGCGA CCTCTGCTGC GCTCGCTTTC AAATCCTGGC GCGAGATGGC GCCGGCGATG CGGCGCAAGC TCCTGCACCG CGTGGCCGAT GCGATCGAGG ATCATGCCGA CGACATCGCC GTGCTCGAAT GCATCGACAC CGGTCAGGCC TATCGCTTCA TGGCCAAGGC GGCGATCCGC GCCGCCGAGA ATTTCCGGTT TTTCGCCGAC AAATGCACCG AGGCGCGCGA CGGGCTGAAT ACGCCGAGCG AAGAGCACTG GAACATCTCC ACGCGGGTAC CGATCGGCCC GGTCGGCGTG ATCACCCCGT GGAACACGCC GTTCATGCTG TCGACCTGGA AGATCGCCCC GGCGCTCGCG GCAGGCTGCA CGGTCGTGCA CAAGCCGGCC GAATGGTCGC CGATCACGGC GCACTGGCTG GCAAAACTCG CCAAGGACGC CGGTATCCCC GATGGCGTGC TCAACACTGT CCATGGCTTC GGCGAGGAGG CCGGCAGGGC GCTGACCGAA CATCCTGCCA TCAAGGCGAT CGGCTTCGTC GGCGAGAGCA CGACCGGGTC GGCGATCATG GCGCAGGGCG CGCCGACTCT GAAACGCGTG CATTTCGAGC TTGGCGGCAA GAACCCGGTG ATCGTGTTCG ACGATGCCGA CCTCGATCGC GCGCTCGACG CCGTCGTGTT CATGATCTAT TCGCTCAACG GCGAGCGCTG CACCTCCTCG AGCCGCCTGC TGGTGCAGCA GAACATTGCC GAGACATTCA CGGCCAAGCT CGCGGCGCGC GTGCGTGCGC TGAAGGTCGG TCATCCGCTC GATCCCGCGA CCGAGGTCGG GCCGCTGATT CATGAGCGGC ACCTCGCCAA GGTCTGCTCT TATGTCGACA TCGCGCGCCA GGACGGGGCG ATCATTGCCG TCGGCGGCAA GCCGGTCGCT GGTCCGGGCG GCGGCCACTA CGTCGAGCCC ACGCTCGTCA CGGGCGCGAG CCAGATCATG CGCGTGGCGC AGGAAGAGGT GTTCGGGCCA TTCCTGACCG TGATCCCGTT CGGCGACGAG GCGGACGCGA TCGCGATCGC CAATGACGTG CAGTATGGCC TCACCGGCTA TGTCTGGACC GGCGACATGG GCCGCGCGCT GCGCGTCGCC GACGCGCTGG AGGCCGGCAT GATCTGGCTG AACTCGGAGA ACGTCCGCCA TCTGCCGACG CCGTTCGGCG GCATGAAGGC GTCCGGCATC GGCCGCGACG GCGGCGACTA TTCATTCGAC TTCTACATGG AGACCAAGCA CGTCTCGCTC GCGCGCGGCA CCCACAAGAT CCAGCGGCTC GGCGTGTAA
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Protein sequence | MDKATPKADI YKANLDRAAP LLAKLKDEGI GHFIDGKVVP AISGATFETK SPIDNTVLAK VARGNAEDID RAATSAALAF KSWREMAPAM RRKLLHRVAD AIEDHADDIA VLECIDTGQA YRFMAKAAIR AAENFRFFAD KCTEARDGLN TPSEEHWNIS TRVPIGPVGV ITPWNTPFML STWKIAPALA AGCTVVHKPA EWSPITAHWL AKLAKDAGIP DGVLNTVHGF GEEAGRALTE HPAIKAIGFV GESTTGSAIM AQGAPTLKRV HFELGGKNPV IVFDDADLDR ALDAVVFMIY SLNGERCTSS SRLLVQQNIA ETFTAKLAAR VRALKVGHPL DPATEVGPLI HERHLAKVCS YVDIARQDGA IIAVGGKPVA GPGGGHYVEP TLVTGASQIM RVAQEEVFGP FLTVIPFGDE ADAIAIANDV QYGLTGYVWT GDMGRALRVA DALEAGMIWL NSENVRHLPT PFGGMKASGI GRDGGDYSFD FYMETKHVSL ARGTHKIQRL GV
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