Gene BBta_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2896 
Symbol 
ID5151723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3002801 
End bp3003463 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID640557775 
Productputative aldolase 
Protein accessionYP_001238929 
Protein GI148254344 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0811936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGATA CTGCGATTCG CGAGGCCATC TGCCGGTTCG GCCGCTCGCT GTTCGAGCGC 
GGGCTGACAC CGGGCTCGTC CGGCAACATC AGCGTGCGGC TCGACGATGG CGGCTGGCTG
GTGACGCCGA CCAACGCCTC GCTCGGCTTC CTCGATCCCG GCAAGCTCTC GCGCCTCGAT
GCCAACGGCA GGCTGATGTC GGGCGACGCG CCGACCAAGG AGGTGCCGCT GCACACCGCG
CTGTACCAGA CCCGCGCCGC CGCCCGCGCC GTGGTGCATC TGCACTCGAC GCATTCGGTG
GCAATCTCGA TGCTGCCGGA GATCGATCCG CTGATGGCGC TGCCGCCGCT GACACCTTAT
TATTTGATGC GCTGCGGCCA GACGGCGCTG GTGCCCTATC ATCGCCCCGG GGATCCGGCC
GTCGCCGACG CGATCAAGGG CCTCGCCGGC CAATACGCCT CGGTGCTGCT CGCCAATCAC
GGGCCGGTGG TGTCCGGCGA CACGCTGGAG GCGGCGGTGT TCGCGATGGA GGAGTTGGAG
GAGACCGCCA AACTCTATCT GCTGCTGCGC GGGCTCAATC CGCGGCATCT GTCGCCGCAG
CAGGTCGACG ATCTGGTGAA GGTGTTCGGC CTCACTCTGC CCGATCACGC CGATCATCAC
TGA
 
Protein sequence
MADTAIREAI CRFGRSLFER GLTPGSSGNI SVRLDDGGWL VTPTNASLGF LDPGKLSRLD 
ANGRLMSGDA PTKEVPLHTA LYQTRAAARA VVHLHSTHSV AISMLPEIDP LMALPPLTPY
YLMRCGQTAL VPYHRPGDPA VADAIKGLAG QYASVLLANH GPVVSGDTLE AAVFAMEELE
ETAKLYLLLR GLNPRHLSPQ QVDDLVKVFG LTLPDHADHH