Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2886 |
Symbol | |
ID | 5152548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2993357 |
End bp | 2994361 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640557765 |
Product | putative ABC transporter permiase component |
Protein accession | YP_001238919 |
Protein GI | 148254334 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0441971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGG CATTCATTCA ACGTCGCCGG CGCGACCTCG TCGTCGCCGC CTTCCTTGCG GCGATCGCCG CGGCCGTGCC GCTGTTCGTC AAGGACGTCT ATGTCCAGAA CATCATGGTG CTGACCCTGA TGTATGCGGC GCTGTCGCAG AGCTGGAACA TCCTGTCCGG CTATTGCGGC CAGATCTCGC TCGGACATGC GCTGTATTTC GGCCTCGGGG CCTATACGAC CGCGATCCTG TTCACGAAGT TCGGCGTGCT GCCCTGGTTC GGCATGCTCG CCGGCGGTCT GATCTCCGCG CTCATCGCGA TGGCGCTCGG CTATCCCTGC TTCCGGCTCG GCGGCCATTA CTTCGTCATT GCCACGATCG TCATCGCCGA AATCACGCTG CTCTTGTTCC AGAACTGGGA TTGGGCGGGC GCCGCGCTCG GCATCGACAT TCCGGTGCGG CGCGACTCCT GGCTGACCTT CCAGTTCACC CGCTCGAAGC TGCCATATTT CTACTTCGCG CTGGCGCTCG CCTGCGTCGC CTGGTTCGTC ACCTGGTGGC TCGAGGACTC CAAATGGGGC TATTGGTGGC GCGCGGTGAA GGACAATCCG GTGGCCGCTG AAAGCCTCGG CGTCGACGTG TTCAACTCGA AGATGGGCGC CGCGGCCGTC TCGGCCTTCT TGGTCGCGAT CGGCGGCAGC TTCTATGCGC AATTCGTCTC CTACATCGAC CCAGAGAGTG TCATGGGCTT CCAGTTCTCG CTGCTGATGG CGCTGCCGGC CGTGCTGGGC GGCATCGGCA CGCTGTGGGG ACCGATGCTG GGCGCGGTGA TCCTGATCCC GCTGACCGAG TTGACCCGCT CCTATATCGG CGGCTCCGGC CGCGGCGTCG ATCTGATCGT CTATGGCGGC CTGATCATCG CGATCTCGCT GGCGCGGCCG CAAGGGCTCG TCAGCCTGTT CTCCCGCAAG CCGAAGCCGG CCGCTCAGCC GGCGCGAGAG GCGGTGGCGT CATGA
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Protein sequence | MDKAFIQRRR RDLVVAAFLA AIAAAVPLFV KDVYVQNIMV LTLMYAALSQ SWNILSGYCG QISLGHALYF GLGAYTTAIL FTKFGVLPWF GMLAGGLISA LIAMALGYPC FRLGGHYFVI ATIVIAEITL LLFQNWDWAG AALGIDIPVR RDSWLTFQFT RSKLPYFYFA LALACVAWFV TWWLEDSKWG YWWRAVKDNP VAAESLGVDV FNSKMGAAAV SAFLVAIGGS FYAQFVSYID PESVMGFQFS LLMALPAVLG GIGTLWGPML GAVILIPLTE LTRSYIGGSG RGVDLIVYGG LIIAISLARP QGLVSLFSRK PKPAAQPARE AVAS
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