Gene BBta_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2886 
Symbol 
ID5152548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2993357 
End bp2994361 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID640557765 
Productputative ABC transporter permiase component 
Protein accessionYP_001238919 
Protein GI148254334 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0441971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG CATTCATTCA ACGTCGCCGG CGCGACCTCG TCGTCGCCGC CTTCCTTGCG 
GCGATCGCCG CGGCCGTGCC GCTGTTCGTC AAGGACGTCT ATGTCCAGAA CATCATGGTG
CTGACCCTGA TGTATGCGGC GCTGTCGCAG AGCTGGAACA TCCTGTCCGG CTATTGCGGC
CAGATCTCGC TCGGACATGC GCTGTATTTC GGCCTCGGGG CCTATACGAC CGCGATCCTG
TTCACGAAGT TCGGCGTGCT GCCCTGGTTC GGCATGCTCG CCGGCGGTCT GATCTCCGCG
CTCATCGCGA TGGCGCTCGG CTATCCCTGC TTCCGGCTCG GCGGCCATTA CTTCGTCATT
GCCACGATCG TCATCGCCGA AATCACGCTG CTCTTGTTCC AGAACTGGGA TTGGGCGGGC
GCCGCGCTCG GCATCGACAT TCCGGTGCGG CGCGACTCCT GGCTGACCTT CCAGTTCACC
CGCTCGAAGC TGCCATATTT CTACTTCGCG CTGGCGCTCG CCTGCGTCGC CTGGTTCGTC
ACCTGGTGGC TCGAGGACTC CAAATGGGGC TATTGGTGGC GCGCGGTGAA GGACAATCCG
GTGGCCGCTG AAAGCCTCGG CGTCGACGTG TTCAACTCGA AGATGGGCGC CGCGGCCGTC
TCGGCCTTCT TGGTCGCGAT CGGCGGCAGC TTCTATGCGC AATTCGTCTC CTACATCGAC
CCAGAGAGTG TCATGGGCTT CCAGTTCTCG CTGCTGATGG CGCTGCCGGC CGTGCTGGGC
GGCATCGGCA CGCTGTGGGG ACCGATGCTG GGCGCGGTGA TCCTGATCCC GCTGACCGAG
TTGACCCGCT CCTATATCGG CGGCTCCGGC CGCGGCGTCG ATCTGATCGT CTATGGCGGC
CTGATCATCG CGATCTCGCT GGCGCGGCCG CAAGGGCTCG TCAGCCTGTT CTCCCGCAAG
CCGAAGCCGG CCGCTCAGCC GGCGCGAGAG GCGGTGGCGT CATGA
 
Protein sequence
MDKAFIQRRR RDLVVAAFLA AIAAAVPLFV KDVYVQNIMV LTLMYAALSQ SWNILSGYCG 
QISLGHALYF GLGAYTTAIL FTKFGVLPWF GMLAGGLISA LIAMALGYPC FRLGGHYFVI
ATIVIAEITL LLFQNWDWAG AALGIDIPVR RDSWLTFQFT RSKLPYFYFA LALACVAWFV
TWWLEDSKWG YWWRAVKDNP VAAESLGVDV FNSKMGAAAV SAFLVAIGGS FYAQFVSYID
PESVMGFQFS LLMALPAVLG GIGTLWGPML GAVILIPLTE LTRSYIGGSG RGVDLIVYGG
LIIAISLARP QGLVSLFSRK PKPAAQPARE AVAS