| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2739 |
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| Symbol | |
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| ID | 5152384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2834180 |
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| End bp | 2835742 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640557629 |
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| Product | putative outer membrane efflux protein |
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| Protein accession | YP_001238783 |
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| Protein GI | 148254198 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.457647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCGA CGACGCGACG GATCCTCTCG AGACGCGGCA CGGCGGCGAC GCCGCTGGGC
CTCGTCGGCT GCAGCGTGCT GCTCGCGTCC TGCGCCGTCG GGCCGGACTT CATGCCGCCT
GACGCGCCGC CCGCGACCGG CTACACGTCC GAGCGCCGGC TCGCTCCGAC CGGAAGTGCG
GCGACGCCGG GCGGCAATGC GCAAAGTTTT GCCGCCGGGA GCGACCTGCC CGGCACCTGG
TGGGCGCTGT TTCATTCCCG GCAGATCAAC GCCTTTGTCG AGGAGGCGAT TCGCAACCAT
CCGGACATTG AAGCTGCGCA ATATGCGCTG CGGGCCGCGC GCGAGAACGC GCTGTCGCAG
CAGGGATCGC TGTTTCCACA GGTAAGCGCG AGCGGATCGG CCGAGCGCAC GCAGGCCTCG
ACCACGCAGT CCGGGCAATG GCCGGGCCAG ACCTCGCTCT ACACACTCTA TGGTGCCTCC
GTCAGCGTCA GCTATGCGCT CGATCTGTGG GGCGGCACCC GCCGCCAGGT CGAGGCGCTG
CAGGCGCAGG CGGACTACCA GGCGTTCAGG ATGGAAGCGA CCTATCTCTC GCTGACCGCC
AATGTCGTGA CCGCTGCGAT CACCGACGCC TCGCTGCGCG ATCAGATCGC CGCGACCGAG
GAGATCATCA AGGCGGAGAC CGATCAGCTC GAGCGGATCC AGCGCCAGTT CGACGTCGGC
GCCATCTCCA AATCGGACGT GCTGTCGCAA GAGGCGACGC TGGCGCAGGC CAAGGCAACG
CTCGCCCCGC TGCAGAAGCA GCTGGCGCAG CAGCGCAATC AGCTGATGGC CTATCTCGGC
CGGCTGCCGC ATCAGGATCG CGGCGAGCAT GTCAGCCTTG CCGAGCTCCG ACTGCCGCGC
AAGCTGCCGG TCTCGCTGCC CTCCTCCTTG GTCCGCCAAC GGCCCGACAT CCGGCAGGCC
GAGGCGACCT TGCATCAGGC CACCGCGACG GTCGGCGTCG GCATTGCCAA TCTGCTGCCG
CAGGTCACGC TGTCGGGCAG CTATGGCGCG AGCGGACCGG AGCGGCTGTT CTCGCCGACC
ACGCTGGTAT GGGAGGCCGC CGCGAGCGTC AGCCAGAAGC TGATCGACGG CGGCGCGCTC
TACCACACCA AGGAGGCCGA CGTTGCGACG TTCGAGCAGG ACCTGTCGCT CTACAAGAGT
ACGGTCATCA CCGCATTTCA GAACGTCGCC GACTCCTTGC GCGCCATCCA ATACGACGCC
GAGGCGCTGA AGGCGCAGGC CGCCGCCGAG AAGGCGACCG CCGACAGCCT CAACATGGCG
ATCGAACAGT TCAAGAGCGG CGCCGTGCCC TACGCCAACG TCATCAACGC GCAGCAATCC
TATCTCAACG CGCGGGTCTC CCGCATCAAG TCGCAGGCCA CCCGCTTCAC CGACACCGCG
GCGCTGTTCC AGGCGCTCGG CGGCGGCTGG TGGCATCGCC AGGACGAGAC ACCAGCGGCG
CTGCCCCGCG CCAACCCCGG CTATTTCGCC GGCCCCAATC GGACGACCCA GGAAGCAATG
TGA
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| Protein sequence | MFPTTRRILS RRGTAATPLG LVGCSVLLAS CAVGPDFMPP DAPPATGYTS ERRLAPTGSA
ATPGGNAQSF AAGSDLPGTW WALFHSRQIN AFVEEAIRNH PDIEAAQYAL RAARENALSQ
QGSLFPQVSA SGSAERTQAS TTQSGQWPGQ TSLYTLYGAS VSVSYALDLW GGTRRQVEAL
QAQADYQAFR MEATYLSLTA NVVTAAITDA SLRDQIAATE EIIKAETDQL ERIQRQFDVG
AISKSDVLSQ EATLAQAKAT LAPLQKQLAQ QRNQLMAYLG RLPHQDRGEH VSLAELRLPR
KLPVSLPSSL VRQRPDIRQA EATLHQATAT VGVGIANLLP QVTLSGSYGA SGPERLFSPT
TLVWEAAASV SQKLIDGGAL YHTKEADVAT FEQDLSLYKS TVITAFQNVA DSLRAIQYDA
EALKAQAAAE KATADSLNMA IEQFKSGAVP YANVINAQQS YLNARVSRIK SQATRFTDTA
ALFQALGGGW WHRQDETPAA LPRANPGYFA GPNRTTQEAM
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