Gene BBta_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2725 
Symbol 
ID5156208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2818709 
End bp2819614 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID640557616 
Productputative phenylacetic acid degradation-related protein 
Protein accessionYP_001238770 
Protein GI148254185 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.267873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA CGCAGCCGCC CACCGCACCA CCCTCCTTCG ACGCACTCGC CGAGGCAATC 
AGGCATCGTC GCTCGGTCTA CGGCCATCTC AGCGGGCTCA GGATGGATCG CTACGCCCCC
GGTGAGGTCT GGTCGACGTT GCCCTATCGG CCGGTGTTCG TCGGCGACAG CGACACCGGC
GTGATCCATG GCGGCGTCGT CACCGCGATG CTCGATGAAA GCTGTGGCAT GGCGGTGCAG
CTTGCGCTCG ACGGCACGCG GGCTATTGCG ACCCTCGATC TGCGCATCGA CTATCAGAAG
CCGGCGACGC CCGGCCTCGA CATCAAGGCG CATGCGGTGT GCTTCCGCGT CACGCGCTCG
ATCGCCTTCG TGCGTGCGAC GGCCTATCAG GAGCAGGAGA GCGAGCCTGT CGCGACCGCG
ACCGCCTGCT TCATGGTCGA CGCCAACCGC ACCAACATGC TCGTCGACCG GCCGGTCTTC
GCCGGTGAAC CGGCGCCGCT CGAAGCTCCC GAGGATGGCG GCGGACTGTT TGCGTCCAGC
CCGTTCGCGC GCTGTCTCGG GATCCGCGCC GGGGAGGGCG ACACGCTGGT GATGCCGTTC
TCGCAGCGGA TTATCGGCAA TCCGGTGCTG CCCGCAATCC ATGGCGGCAT GACCGGCGCA
TTCCTGGAAA CCACGGCGAT CATCACGGTC ATGCGCGAGC TCGGTGTGTC CGCGCCGCCG
AAGCCGATCG GTCTGACCAT CAACTATCTC AGGTCGGGCC GCGCGCTCGA CAGCATGGCC
TCCGCCTCGA TCGTCAAGCA GGGCCGCCGC GTCGTCGCCT TCGAGGCCCG CGCCTGGCAG
GACGACGCAA CCAAGCCGAT CGCCACCGCC TTCGGCCATT TCATGCTGCG GCAGGAGCAG
GACTGA
 
Protein sequence
MTNTQPPTAP PSFDALAEAI RHRRSVYGHL SGLRMDRYAP GEVWSTLPYR PVFVGDSDTG 
VIHGGVVTAM LDESCGMAVQ LALDGTRAIA TLDLRIDYQK PATPGLDIKA HAVCFRVTRS
IAFVRATAYQ EQESEPVATA TACFMVDANR TNMLVDRPVF AGEPAPLEAP EDGGGLFASS
PFARCLGIRA GEGDTLVMPF SQRIIGNPVL PAIHGGMTGA FLETTAIITV MRELGVSAPP
KPIGLTINYL RSGRALDSMA SASIVKQGRR VVAFEARAWQ DDATKPIATA FGHFMLRQEQ
D