Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2697 |
Symbol | ligJ |
ID | 5155646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2789839 |
End bp | 2790864 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640557589 |
Product | 4-oxalomesaconate hydratase |
Protein accession | YP_001238743 |
Protein GI | 148254158 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.745573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.611025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCATCG ACGTGCACGG CCATTACACG ACGGCTCCGA AGGCGCTGGA AGAGTGGCGC AACCGGCAGA TCGCGGGCAT CAAGGACGCT TCCGTGATGC CGAAGGCCTC CGAGCTCAAG ATCAGCGACG ACGAACTGCG CGAGAGCATC GAGGCCAACC AGCTCAAGAA GATGAAGGAG CGCGGCAGCG ACCTCACCAT CTTCTCGCCG CGCGCGAGCT TCATGGCGCA CCACATCGGC GACTTCCAGG TGTCCTCGAC CTGGGCCGCG ATTTGCAACG AGCTGTGCTA CCGCGTCAGC AAGCTGTTCC CGGACCATTT CATCGGCGCC GCGATGCTGC CGCAGTCGCC CGGCGTCGAC CCCAAGACCT GCATTCCCGA GCTGGAGAAG TGCGTCAAGG AGTACGGCTT CGTCGGAATC AACCTGAATC CGGATCCGTC GGGCGGTCAC TGGACCTCGC CGCCGCTGTC CGACCGGCAT TGGTATCCGA TCTATGAGAA GATGGTCGAG CTGGACATTC CCGCGATGAT CCACGTCTCG ACCAGCTGCA ACGCCTGTTT CCACACCACG GGCGCGCATT ATCTCAATGC CGACACCACG GCGTTCATGC AGTGCCTGAC CTCGGACCTG TTCAAGGACT TCCCGACCTT GAAGTTCCTG ATCCCGCATG GCGGCGGCGC GGTGCCGTAT CATTGGGGCC GGTTCCGTGG CCTCGCCCAG GAGCTCAAGA AGCCGCTGTT GAAGGATCAT CTGCTCAACA ACATCTTCTT CGACACCTGC GTCTATCACC AGCCCGGCAT CGATCTGCTG ACCGGCGTGA TCCCGGTCGA CAACATCCTG TTCGCGTCGG AGATGATCGG CGCCGTCCGC GGCATCGATC CGGAGACCGG CTTCTACTAT GACGACACCA AGCGCTATAT CGAGGCCGCC AAGCTGACCC CCGAGCAGCG CCACCAGATC TATGAAGGCA ATGCGCGGCG CGTGTTCCCG CGGCTCGACG CCGCGTTGAA GGCCCAGGGC AAGTGA
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Protein sequence | MIIDVHGHYT TAPKALEEWR NRQIAGIKDA SVMPKASELK ISDDELRESI EANQLKKMKE RGSDLTIFSP RASFMAHHIG DFQVSSTWAA ICNELCYRVS KLFPDHFIGA AMLPQSPGVD PKTCIPELEK CVKEYGFVGI NLNPDPSGGH WTSPPLSDRH WYPIYEKMVE LDIPAMIHVS TSCNACFHTT GAHYLNADTT AFMQCLTSDL FKDFPTLKFL IPHGGGAVPY HWGRFRGLAQ ELKKPLLKDH LLNNIFFDTC VYHQPGIDLL TGVIPVDNIL FASEMIGAVR GIDPETGFYY DDTKRYIEAA KLTPEQRHQI YEGNARRVFP RLDAALKAQG K
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