Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2695 |
Symbol | ligR |
ID | 5155644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2787195 |
End bp | 2788094 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640557587 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001238741 |
Protein GI | 148254156 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.311344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCA AGCAGCTCGA ATATTTCGTG CAGGTGGCCG AGCTCGGCTC GTTCAGCAAG GCGGCGAGCG TGCTCGACGT GGCACAGCCG GCGCTGTCGC GGCAGGTGCG GGCGCTGGAA TCGGAGCTGA AGCAGCAGCT GTTCGCGCGC AATGGCCGCG GGGTCGAACT GACCGAAGCG GGAAAGCGGC TGCTCGATCA CAGCGTCGGC GTGCTGCAGC TGGTGGCGCA TGCACGCGAG GATCTCGGCG CCAGCCGTGA TGCGCCGGTC GGCCGCGTCA CCATCGGCCT GCCGCCGAGC ATCGCGCGGC AATTGACGCT GCCGCTGATC GACCGCTTCC GGAAAGAGTA TCCGGCGGCG CGACTGGCCG TCGTCGAAGG ATTGTCGACG CATGTGGTGG AGTGGGTCAC CACCGGACGC ATCGATGTCG GCATGGTCTA CAATCCCGAG GCCCAGGCCG GCATCGAGAT CACGCCGGTG CTGCAGGAGC CGCTCGCGCT GGTGAGCCAT GCGCCCAAGG GCAAGCGCCG CACCACCGCG CCGCTGCCGA TGGCCGAGCT GCCGCGCTAC AGCCTGATCA TGCCCGAGCG CGTGCATGCG ATGCGCAGAT TGCTGGAGAC CCAGGCTGCG CTGGCCGGGA TCAAGCTCGA CATCGCCTGG GAGGTGTCGA GCGTGCCCTC GATCATCGAC CTCGTCTGCG CCGGCTACGG CCACGCCGTG CTGACGCCGA GCGGCGTCGC CGCCTCGGGC CGCGCCAGCG AGCTCGCCAT TCGCCCCCTG ACCGAGCCCG CCCCGACCAG CGTGCTGTGC TTCGTCACCT CGGCGCACAA GCGGCCGACG CCGCTGGCGC AGCAGACGAT CAAGCTGGCG ACCGCGCTGA TCAGGAAGCT GCCGCGCTGA
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Protein sequence | MNLKQLEYFV QVAELGSFSK AASVLDVAQP ALSRQVRALE SELKQQLFAR NGRGVELTEA GKRLLDHSVG VLQLVAHARE DLGASRDAPV GRVTIGLPPS IARQLTLPLI DRFRKEYPAA RLAVVEGLST HVVEWVTTGR IDVGMVYNPE AQAGIEITPV LQEPLALVSH APKGKRRTTA PLPMAELPRY SLIMPERVHA MRRLLETQAA LAGIKLDIAW EVSSVPSIID LVCAGYGHAV LTPSGVAASG RASELAIRPL TEPAPTSVLC FVTSAHKRPT PLAQQTIKLA TALIRKLPR
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