Gene BBta_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2681 
Symbol 
ID5149248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2772541 
End bp2773302 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID640557574 
Productputative oxidoreductase 
Protein accessionYP_001238728 
Protein GI148254143 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.405099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.594459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAC TTCCCCACGC CGCACATGCC GTTGTGACCG GCGGTGGACG CGGCATCGGC 
CGCGAGATCG CGCGGGCGCT CAAGCAGGCC GGCGCAATTG TCACGATCGT CGGCCGCAAC
GGCGCGACGC TCGATGAAGC GGTCGGGGCT GGATGTGCCG ATCACACGGC GATCGCCGAC
GTTGCCGATC AGGCTGCACT GAGTGCAGCG GTTGCCGTGG CTGCGACACG TCAGCCGATC
GACATCCTCG TTGCAAATGC GGGCAGCGCA GAATCAGCGC CATTCCTGAA GTCGGACGCC
GCGTTGTTCC GCCGCATGAT GGACATCAAC TTCATGGGCG TCGTGCATGC CGCGCAGGCG
GTGCTGCCCG CCATGAAGAG CAGGCCCTAC GGCCGCATCG TCGCAGTGGC GTCCACGGCA
GGCTTGAAGG GATATCCTTA TGTCAGCGCC TACACCGCGG CCAAGCACGC GGTGGTCGGT
CTCACGCGCT CGCTGGCGCT GGAATTGGCT GCCACGCGGG TGACCGTGAA CGCCGTCTGT
CCTGGTTTCA CCGACACGGA TCTCGTCGCG GAGAGCGTCG ACAACATCAT GAAGAAGACC
GGTCGCAGCC GCGAGCAGGC GATCGCTGAG CTCGCCAAGC ACAATCCGCA AGGGCGGCTC
ATCATGCCGC AGGAAGTCGC CGACGCCGTC GTGTGGCTGT GCGGTGCCGG CGCGGGCGCC
ATCACAGGGC AGGCGATCGC TGTCGCAGGC GGCGAAGTAT GA
 
Protein sequence
MSGLPHAAHA VVTGGGRGIG REIARALKQA GAIVTIVGRN GATLDEAVGA GCADHTAIAD 
VADQAALSAA VAVAATRQPI DILVANAGSA ESAPFLKSDA ALFRRMMDIN FMGVVHAAQA
VLPAMKSRPY GRIVAVASTA GLKGYPYVSA YTAAKHAVVG LTRSLALELA ATRVTVNAVC
PGFTDTDLVA ESVDNIMKKT GRSREQAIAE LAKHNPQGRL IMPQEVADAV VWLCGAGAGA
ITGQAIAVAG GEV