Gene BBta_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2596 
Symbol 
ID5154504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2690100 
End bp2691065 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID640557500 
Producthypothetical protein 
Protein accessionYP_001238654 
Protein GI148254069 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.647212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA TCGGCCAGGC CGAAACGGCC GACGAGCTTC GCGCCGAGCG CGCTCTTGCC 
GGGCTCCTGC CTGCGGATGC TGGCCGGCTC GGCTATGAGG CCGCTGCGTT TCCGGTTGCG
TCGCCGTCCT ACCAGGCCGT GGAATCGACG AGCTTTCACG TCGCGCGCGA CGGGACGGAG
ATGAGCCTGT TTCTGCGCCT CGGTGCGGCC GAGGTCGCCG AGCTGGTCGA TCGCGACGTC
GCTGTGGCCG CAGCCCGCCA TGTGGCCGGC CTCGGGCTGG CTCCGGCCGT GATTGCAGCC
GATGCCGCGA GCGGCAGCCT GCTGTTGGCG CGCCTGGGCG CGGGCTGGAA GGTTGCGAAG
ATCGACGATC TCATCGCCCA AGAGAGAGCG GCGCGTCTCG TCGCCATGCA GAAGACGATC
GCAGCGAGCG CGCCATTCGG AAGGCGCTGG TCCGTTTTTG AGGGCATCTC GGCCATCTGG
TCGCTGTTGC CAGCGGCCGG CGTCCCCCTG CCGGGAGACA TCGATTGGAT GAGGGGATGG
ATGAGCAAGA TGGCGGAGGC GATCGATGCC GCCGGCGTCG ATCGCCGGCC GGCGCACGGA
GATCCGCATT CCTCCAATCT GATGCTCGGT CCCCATGGTG AGATGGCGCT GGTCGATTTC
GACATGGCCG GCGACATCGA TCCCTACTAC CAGCTCGGTG CTCAGATGAA TGAGCTGTAT
CAGTTCGAGA GCCAGATGAA GCCGCTGCTC GAAATGCATG ACGGGCGCTT CACTGACGCC
GCCTTCAGTC GCTGCCGGCT CTATGCCGCA GCGGATGATT TCTACTGGGC GCTGCGCAGC
CTGCTGCTGG CCTGCCGCTC GCCGTTGCAA GGCGTCGAGT TCCTCAAATA TGCCGCATGG
CGTTTCCTGC GCTGCCGCAT GTTGCTCGGC AGGCCGGGCT TCGAAGAGTT CCTGCGCACG
CTTTAG
 
Protein sequence
MKRIGQAETA DELRAERALA GLLPADAGRL GYEAAAFPVA SPSYQAVEST SFHVARDGTE 
MSLFLRLGAA EVAELVDRDV AVAAARHVAG LGLAPAVIAA DAASGSLLLA RLGAGWKVAK
IDDLIAQERA ARLVAMQKTI AASAPFGRRW SVFEGISAIW SLLPAAGVPL PGDIDWMRGW
MSKMAEAIDA AGVDRRPAHG DPHSSNLMLG PHGEMALVDF DMAGDIDPYY QLGAQMNELY
QFESQMKPLL EMHDGRFTDA AFSRCRLYAA ADDFYWALRS LLLACRSPLQ GVEFLKYAAW
RFLRCRMLLG RPGFEEFLRT L