Gene BBta_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2571 
Symbol 
ID5153723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2660535 
End bp2661797 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID640557479 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_001238633 
Protein GI148254048 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.517153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.280114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGGG CACGCATCAC GGACAAGGTA TCGAATCTGA TGGTTGCAAA TCCAGCCGGC 
ACGGGATCGC CGCCGACGCC CAGCCGTCCA CATCTCGTCT CGTCCGATGC CGAGGCGATC
GACATCGCGC ATGCGCTGGT CCCGCGGCTT GCCGAGGGCG CTGCGCGGCG CGATCGCGAC
CGGGGGCTGC CTTGGGCCGA GATCGAGCTG TTCACGGCCA GCGGTCTTGG CGGCATCACC
GTGCCGCGCC GGTTCGGAGG CGCCGACGTC TCGCATGAGA CGCTGGTGCG GGTGTTCGCG
ATCCTTGCTG CGGCCGATGC CTCGGTGGCG CAGATCCCGC AAAATCAGTT CGGCGTCCTT
GCGCTCGTGC GCGAGGCTGC GAGCCCCGAG CAGCAGGCGC GCATCTACAG TGACATCCTG
GCCGGTCATC GGATCGGAAA TGCCGGGCCC GAGCGTCACG GCCGCGCCAT CACCCATGTC
ACGACCCAGC TGACGCGCGT GAACGGACGG TTGGAGCTGT CAGGGCAGCG CTATTATTCG
ACGGGCTCGA TCTTCGCGCA CTGGATTCCC ACCCGCGCCA TCGACGACGC CGGCCGGCCG
GTGCTCGCTT GGGTCAGACG CGATGCGCCG GGTGTTCAGG TCGTTGACGA TTGGGATGGC
TTTGGCCAGC GCACCACGGC GAGTGGAACG GTCATCTTCG AGGCCGCGCC GGTCGAGGAA
GAACTGCTGA TCGACCTCGT CCCGCTGGCC TCGCGGCCCG GTCTCGGCGG CCCGCATTCG
CAGATCATCC AGGCGGCGAT CGATGCCGGG ATCGCTGCGG GCGCAATTGA TGCCGCGCTC
GATTTCGTGC GGACGAAGAC GCGGGCCTGG CCATTCACCG TCGCGGCTGC GACGGACGAT
CCCTACATCA TCGGCGAGAT CGGACGGCTG CAGCTCGACC TGCACGCCGC CGAGGAAGTG
CTTGCGCGCG CTGCCCGGAC GCTCGACCGG GTCGCGGCTG CGCCGATCAC GGCGGAAAGC
TCGGCCGAAG CCTCGGTCGC CGTGGCGGAG GCCAAGATCC TCACCACCGA GATTGCGCTC
GAAGCCTCCG AACGCCTGCT CGAATTGGCC GGCTCGTCGG CGACACGCGA GCAGTACAAT
CTCGGACGGT TCTGGCGCGA TGCGCGGGTG CACACGTTGC ATGATCCCGT CCGCTGGAAG
TATCATCTGC TCGGCAACTA CACGCTGAAC GGCGTTCTGC CGCCGCGTCA TCAGTGGAAT
TGA
 
Protein sequence
MPRARITDKV SNLMVANPAG TGSPPTPSRP HLVSSDAEAI DIAHALVPRL AEGAARRDRD 
RGLPWAEIEL FTASGLGGIT VPRRFGGADV SHETLVRVFA ILAAADASVA QIPQNQFGVL
ALVREAASPE QQARIYSDIL AGHRIGNAGP ERHGRAITHV TTQLTRVNGR LELSGQRYYS
TGSIFAHWIP TRAIDDAGRP VLAWVRRDAP GVQVVDDWDG FGQRTTASGT VIFEAAPVEE
ELLIDLVPLA SRPGLGGPHS QIIQAAIDAG IAAGAIDAAL DFVRTKTRAW PFTVAAATDD
PYIIGEIGRL QLDLHAAEEV LARAARTLDR VAAAPITAES SAEASVAVAE AKILTTEIAL
EASERLLELA GSSATREQYN LGRFWRDARV HTLHDPVRWK YHLLGNYTLN GVLPPRHQWN