Gene BBta_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2548 
Symbol 
ID5154049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2634982 
End bp2635776 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID640557457 
Producthigh-affinity branched-chain amino acid ABC transporter ATP-bincing protein 
Protein accessionYP_001238611 
Protein GI148254026 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0518977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.559012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAT CTCCATTCCT CGACCTCGAT GCGATCGAGG TGCTGTATGG TCATGCGATC 
CTGGCGCTGC GCGGCGTCTC GCTCGAGGTC GCGCAAGGCT CGATCGTGGC TCTTCTCGGC
GCCAACGGCG CCGGGAAGAC CACGACGCTG AAGGCGATCT CGAATCTCCT GGCCTCCGAA
CGCGGCCATC TCAGCCGCGG CACGATCACA TGGCGCGGCG AGGTCACGAC CCGGCTCGAT
CCTGCCGATC TCGTTGCCAA GGGAATCGTG CAGGTGCTCG AAGGCCGTCA TGTCTTTCCG
CAGCTCACCG TCGAGGAGAA TCTGCTCAGC GGCGGTTTCC TGCGCCGGCC GAGCCGTCGC
GCGCTCACCG ACGATCTTGA ACGGGTCTAC AGCTGGTTTC CGCGTCTGAA GCAGCGTCGC
AAGGCGCGGT GCGGCCTCAC CTCGGGCGGT GAGCAGCAGA TGGTGGCGAT CGGGCGGGCC
TTGATGACGC ATCCGACCCT CGTGCTGCTG GACGAACCCT CGATGGGCCT GGCTCCGATC
ATCGTCGAAG AGATCTTTCA CATCATTCGC GACCTCAACA CGAAAGAGGG CGTCAGCTTC
GTCCTGGCCG AGCAGAACGC GCATCTCGTC CTGCGCTTCG CCGATCACGG CTACGTCCTC
GAGAACGGGC GGGTCGCGGC CTCCGGCACC GCGGCCGAGC TCGCCGCGCG CGATGACGTC
GCGGAATTCT ATCTCGGCTC GGCAGCGAGC GGTGCGCGGC CGGCGGCGTT GGCCCAGCAT
GATCCCGTCG CGTGA
 
Protein sequence
MTTSPFLDLD AIEVLYGHAI LALRGVSLEV AQGSIVALLG ANGAGKTTTL KAISNLLASE 
RGHLSRGTIT WRGEVTTRLD PADLVAKGIV QVLEGRHVFP QLTVEENLLS GGFLRRPSRR
ALTDDLERVY SWFPRLKQRR KARCGLTSGG EQQMVAIGRA LMTHPTLVLL DEPSMGLAPI
IVEEIFHIIR DLNTKEGVSF VLAEQNAHLV LRFADHGYVL ENGRVAASGT AAELAARDDV
AEFYLGSAAS GARPAALAQH DPVA