Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2539 |
Symbol | |
ID | 5153944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2624919 |
End bp | 2626232 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640557448 |
Product | putative ABC transporter, substrate binding protein |
Protein accession | YP_001238602 |
Protein GI | 148254017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAC CGAACGAGAC TATTGGGATC AGCAGACGCT CGTTGCTTGC TGCCGCGGCG GCCGTGGCCG GCGCCGGAGC CCTGCAGCTG TCGCCGCTTC TGCGGTCGGG TGCCTTTGCA GGTCAGTCGC TGAACCTGAC GATTATCCAG CCGCATGCGA TTGCCGGCGA GGTGCTGAAG AAGCTGTTCC AGGAGCAGGC GGGCGTCACG CTCAACTTCA CCGTCATTCC GTACGACCAG GTTCACGCCC AGGCGACACT CGACGTCCAG TCTGGCGCCA ACCGCTTTGA CGTGCATGAC TACTGGTATA CGAGCATCGG CGCGCTGGTG GATGATAAGG TCGTCGTCGA CGTGACCGAC CTGATCGAGC GCGACAAGGA CAAGATCAAT CCCGGCGATT TCATCGGTTC GATCTATGAT GCCTATACGC TGGTGAACGG CCGCCGCTAC GGTTTGCCTT ATGATGGTGA TTCTCACGTG TTGTTCTACA ACACCGAGAT TCTGAAGCGG CATGGCCTGG AGGCACCAGC GACCTGGGAT GCCTATTATC AGGCGGTGAA GACGATCACA GAAAAGGAGA AGGGCAACGG CATCTACGGC ACCGCGCTGC TCGGCTTCAA GGTTCCGGTG ATCATCGTCT CGAGCTTCGC CAATCGCCTC GCCGGGTTTG GCGGGCGGTT CCTGAAAGAC GGGCGTCCGG ATCTGCTGTC GGAGGAGGCC GTGGCCGCGG CGGAGGAACT GGTGCGGGTG GCGCCCTATG CGCTGCCGAC GCCGTCCGAA ACGGCGTTCG ATCAGGCGCT GCCCGCTTTC CTGTCGGGCA AGGTCGCCTT TCTGGAGTTC TGGACCGATC TTGGCGTCCG CGCGCAAGAC CCGCAGAATT CGAAGATTGT CGACAAATGG GACGTGAGCC AGCTTCCGGT CGGCGGCAAG AACAAGACGC CGACCGCGGC TCTCGATGCC GGCTTCGGCT GGGCCATCTC GACGGGTTCG ACCAAGAAAG AGCTGGCCTG GGAATTCGTG CGCTGGGCGA GCTCCAGCCA GGTCGGGACC ACGCTGCTGA CCACGCCGAA TTCCGGCATC GATCCCATCC GTCGATCCAA TCTGGACAAC CCAGACTACA AGGCGTTCGC GCCGAGGGTG CAGCGCGCGG CGTCGGCCGC GTTCGGCAAC GCCTTGCCGT GGCCGAACGT GGCGCAGACG CCGAAGCTAC TGGACGCGCT GACCGAGCAG CTCGCTCTCA TTCTGGCCGG GCAGGTCAAG CCGAAGGCAG GGCTCGAGGC GGCGCAGCGT GCCTGGGAAC ATCTGCTTGC CTGA
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Protein sequence | MTTPNETIGI SRRSLLAAAA AVAGAGALQL SPLLRSGAFA GQSLNLTIIQ PHAIAGEVLK KLFQEQAGVT LNFTVIPYDQ VHAQATLDVQ SGANRFDVHD YWYTSIGALV DDKVVVDVTD LIERDKDKIN PGDFIGSIYD AYTLVNGRRY GLPYDGDSHV LFYNTEILKR HGLEAPATWD AYYQAVKTIT EKEKGNGIYG TALLGFKVPV IIVSSFANRL AGFGGRFLKD GRPDLLSEEA VAAAEELVRV APYALPTPSE TAFDQALPAF LSGKVAFLEF WTDLGVRAQD PQNSKIVDKW DVSQLPVGGK NKTPTAALDA GFGWAISTGS TKKELAWEFV RWASSSQVGT TLLTTPNSGI DPIRRSNLDN PDYKAFAPRV QRAASAAFGN ALPWPNVAQT PKLLDALTEQ LALILAGQVK PKAGLEAAQR AWEHLLA
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