Gene BBta_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2470 
SymbolaroC 
ID5152219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2556436 
End bp2557521 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID640557386 
Productchorismate synthase 
Protein accessionYP_001238541 
Protein GI148253956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA ACACCTTCGG CCACATGTTC CGCGTCACCA CCTTCGGCGA GAGCCATGGC 
GTGGCCATCG GCTGCGTGGT CGACGGCTGT CCGCCGCGCA TTCCGCTGGA GCCTGCGGAG
ATCCAGGTCG ATCTCGACCG CCGCCGGCCC GGCCAGTCGC GCTTCACCAC CCAGCGCCAG
GAGCCGGACC AGGTGAAGAT CCTGTCCGGC GTGATGCCCG ATCCCGACAC CGGCGCGCAG
GTCACCACGG GCACGCCGAT TGCGCTCTTG ATCGAGAACA CCGACCAGCG CTCGAAGGAC
TATTCCGAGA TCAAGGACAA GTTCCGCCCG GGCCATGCCG ACTTCACCTA TGAGGCCAAA
TACGGCCTGC GCGATTATCG CGGTGGCGGC CGCTCCTCGG CGCGCGAGAC CGCGACGCGC
GTCGCGGCGG GCGCGATCGC GCGCAAGATC CTGGCGGGCG TCAAGGTGCG CGGCGCGCTG
GTGCAGATGG GGCCGCACAA GATCGACCGC GCCAAGTGGG ACTGGGACGA GATCGCGCGC
AACCCGTTCT TCTGTCCCGA CAAGGACAAA GCGGCGTTCT TCGAGGACTA TCTCGACGGC
ATCCGCAAAT CCGGCTCCTC GATCGGCGCG GTGCTGGAGA TCACCGCCGA AGGCGTGCCG
GCGGGACTCG GCGCGCCGCT CTACGGCAAG CTCGACGCGG ATCTGGCGGC GGCGATGATG
AGTATCAACG CCGTCAAGGG CGTCGAGATC GGCGCCGGTT TTGCTGCGGC CGAACTGACC
GGCGAGGAGA ACGCCGACGA GATGCGCTCG GCCAATGACG GCACGCGCTT CCTCTCCAAC
AATGCCGGCG GCATTCTCGG CGGCATCGCC ACCGGGCAGC CGATCGTGGT GCGCTTCGCC
GTCAAGCCGA CCTCGTCGAT CCTGACCCCG CGCCAGACCG TCGATCGCGC CGGCCACGAG
ACCGAGATCC TGACCAAGGG CCGTCACGAC CCCTGCGTCG GCATCCGCGC CGTGCCGGTC
GGCGAAGCGA TGATGGCCTG CGTGCTCGCC GACCATCTGC TGCGCCATCG CGGCCAAGTC
GGCTGA
 
Protein sequence
MSFNTFGHMF RVTTFGESHG VAIGCVVDGC PPRIPLEPAE IQVDLDRRRP GQSRFTTQRQ 
EPDQVKILSG VMPDPDTGAQ VTTGTPIALL IENTDQRSKD YSEIKDKFRP GHADFTYEAK
YGLRDYRGGG RSSARETATR VAAGAIARKI LAGVKVRGAL VQMGPHKIDR AKWDWDEIAR
NPFFCPDKDK AAFFEDYLDG IRKSGSSIGA VLEITAEGVP AGLGAPLYGK LDADLAAAMM
SINAVKGVEI GAGFAAAELT GEENADEMRS ANDGTRFLSN NAGGILGGIA TGQPIVVRFA
VKPTSSILTP RQTVDRAGHE TEILTKGRHD PCVGIRAVPV GEAMMACVLA DHLLRHRGQV
G