Gene BBta_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2467 
Symbol 
ID5151843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2554192 
End bp2554680 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content70% 
IMG OID640557383 
ProductECF family RNA polymerase sigma factor 
Protein accessionYP_001238538 
Protein GI148253953 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT TCCGCCAGAG CGTCGAGGCC ATGATTCCGG CACTGCGCCG CTATGCGCGG 
GCGTTGGCGC GCGACATGGA CGCGGCCGAC GACCTCGTCC AGGACACTCT GGTGCGGGCG
CTGCGGTCGG AACGGCTGTT CCTCGGCGGC GACATCAGGA GCTGGCTGTA CACGATCCTG
ACCAACCTCA ACAAGAACCG CCGGCGCTCG CTGGCCCGCA GGCCGCTGCT CATGCCGCTC
CACGACGACA ATCCCGACGC CAGCGGCACC GAGGCCGAGG GCCGCGATAT CGAACGCGCG
CTGGCGACGC TCGTCGAGGA ACAGCGCGCC GTGCTGCTGC TCGTCGTCCT GGAGGGGATG
AGCTATCGCG AGGTGGCCGA CATCCAGGGC GTGCCGATCG GGACCGTGAT GTCCCGCCTC
GCCCGGGCCC GCGCCCATGT CCGCGCCGTG ATCGAAGGTG AACGGCCGGC CCTGCGGAGG
GTGAAATGA
 
Protein sequence
MSAFRQSVEA MIPALRRYAR ALARDMDAAD DLVQDTLVRA LRSERLFLGG DIRSWLYTIL 
TNLNKNRRRS LARRPLLMPL HDDNPDASGT EAEGRDIERA LATLVEEQRA VLLLVVLEGM
SYREVADIQG VPIGTVMSRL ARARAHVRAV IEGERPALRR VK