| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2415 |
|---|
| Symbol | pncA |
|---|
| ID | 5151692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2499673 |
|---|
| End bp | 2500296 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640557333 |
|---|
| Product | nicotinamidase/pyrazinamidase |
|---|
| Protein accession | YP_001238488 |
|---|
| Protein GI | 148253903 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.868492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCA AGACCAATGA GGATTTGCTG CTCATCATCG ATGTGCAGAA CGATTTTTGT
CCCGGCGGCG CGCTCGCCGT GAGCGATGGC GACGCGGTCG TCCCGGTGAT CAACCGGCTC
AGCGGGCTGT TTGATCACGT CGTTCTCACC CAGGATTGGC ACCCCGCCGG ACACAGCTCC
TTCGCTTCCA GCCATCCGGG CAAGGCGCCG TTCGAGAGCG TGCCGATGGC CTACGGTCCG
CAGACGCTGT GGCCGGATCA CTGCATCCAG GGCACGCCGG GCGCGGCCTT TCATGCCGGT
CTAGCGACCG ACAAGGCGCA ATTGATCATC CGCAAGGGCT TTCGTCCGGC GATCGACTCC
TATTCGGCGT TTTTCGAGAA CGACAAGACG ACGCCGACCG GCCTTGCCGG CTATCTGCGC
GAACGCGGCT TGCGCCGGGT GTTTCTGGTC GGGCTCGCGA CCGATTTCTG CGTGCATTAT
TCGGCGGTCG ATGCACGCCG GCTCGGCTTC GAGGCCGTCG TGATCGAGAG CGCCTGCCGC
GGGATCGATC TCGGCGGATC GATGGCGGCC GCGAAGGCGC AGGGCGCCGA GGCGGGCGTG
ACCAGGATCG CCGAACTGGC TTGA
|
|---|
| Protein sequence | MQIKTNEDLL LIIDVQNDFC PGGALAVSDG DAVVPVINRL SGLFDHVVLT QDWHPAGHSS
FASSHPGKAP FESVPMAYGP QTLWPDHCIQ GTPGAAFHAG LATDKAQLII RKGFRPAIDS
YSAFFENDKT TPTGLAGYLR ERGLRRVFLV GLATDFCVHY SAVDARRLGF EAVVIESACR
GIDLGGSMAA AKAQGAEAGV TRIAELA
|
|---|
| |