| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2290 |
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| Symbol | |
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| ID | 5153956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2371050 |
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| End bp | 2372990 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640557216 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001238372 |
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| Protein GI | 148253787 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.666302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTCA ATCTGCCGCA GATCTCCCTG AGCGTGTCGA TCAGGAACTC GCTCCTGACC
TCGGTATTCC TGCTGCTGGC CATTCTGGCC GGCGTGTCGG TGCTGGCGAC GATGCGGCTG
TCGGCGCTGC AGGACGCGGT CGAGAGCATC AACCGCGACC GGCTGCCGGA GATCCGCGCC
CTCGCCGATC TCAATGTCGA TGTCGCCCAC ACCCACCTCG TCGCGATCCG CGCCGCATTG
TCCACGGCGG CCGAGCCGCG TGCCGCGGCC GAGCAGGAGC TCCGCCGCCG CACCACCGAG
GTCGATGCGA AGATCGCGCG CTTCAAGGAG AGCATCGGCG ACGACGCGCC GATGAGGATG
GCGTTCGACC AGTTCGTCAA CAAATGGGAC ATGTACCAGA AGCAGCAGGC CGTCATGCTG
GAGCCGGAGG TCGGCGCCAA CCGCGACCGT CTGGAGCGTG TCGTCAACAT CGAGACGCCC
CCGCTCTTCC AGGCCGTGGT CGATGCGGTC GAGCACGGCA TCAGGCTCGC CGATCACCGC
GCGGACAGCG CGATCAACAG CGCAACGCTG GACGCGCAGA TCTTTCGCTG GGTGCTGTGG
TCGGTCAACG GCGTCAGTAT CATGATCGGG CTTGCCACGC TGCTCTTCGT GATTCACGAC
GTCTCGATGC CGATCTTCCG GATCACGCGC AGCATGGAGG CGATCGCCAA GGGCGAGCTG
CAGACCGAGA TCCCCTATGC CGATCACACC AACGAGCTCG GCCTGATGGC GCGGGCGCTG
GCGGTGTTCC GCGCGAGTCT GGTCGAGAAC GAACGGCTCA ACGCAGCGAC ACGGACCTTG
TCGGAGCTCA GCGAATGGCT GCAATCGGCA AAGTCCGAGC CGGAGCTGTA CCAGATGATC
TCGACAGTGC TGGGTGGCCT GATGCCGGAA TGCACCGGCG CGCTCTACAT CTATGCCGAC
AGCCGCGACG TGCTCGAGAT CGCCGCCGAA TGGAACGGCA GCTCGACGAC GCGCGCGCTG
CATCCGGACG ATTGCTGGAG CCTGCGCCGC GGCCATGTCT ACATCCACGG CACCAGCGAG
GTCGAATTCC GCTGCGACCA CGTGCATGAC GGCGTCAACG AGAACTATTG CTGCATCCCG
ATCCTGGCCC ATGGCGAGAC CGTCGGCCTG CTGCATGTCG AATACAACTC CACGGGCCAG
GAGACCGAGG CCGAGGCCAA GGCGCGTTTT GCCGATCGCG CAAGGCTGGG GCTCGCCTGC
GCCGAGCATC TGTCGATCGC CATCGCCAAC GTGAAGCTGC GCGAGGGCCT GCGCGATCAG
TCGCTGCGCG ATGCGCTGAC CGGGCTGAAC AACCGCCGCT ACCTGATCGA GACCGCTCGC
CGCGAATTGC TGCGCGCCGC GCGCAGCCGC ACGCCGGTCA GCGTCGTGAC ACTCGACATC
GATCACTTCA AGTCGTTCAA CGACAATCAC GGCCACGAGG CCGGCGACAC CGTGCTGCGC
CACATCGGCG AGATCCTCAA GGCGACGTTC GCCGACGGCG AGATGCCGTG CCGCCTCGGC
GGCGAGGAGT TCGTGGTGCT GCTGCCGAAC TGCACCATCG AGGAAGCCGC GCTGCGCGCC
GAGGAGCTGC GCGCCCGCGT CGAGGCGCTC AACATCAGCT ATGGTGACGG CATGCTGCCG
CGGGTGACGA TCTCGGTCGG CGTCGCCGCC TATCCCGAGG CCGGCATCGA TCTGCCGGAG
ATCCTGCGCG TCGCCGACGG CGCGCTGTAC CGTGCCAAGC AGAGGGGCCG CAACCGGGTC
GAGCTCGCCT CCGGCGGCAT GGTCCCGCCG ATCGACGAGA TGACCAGCCG GGCCGTCGCG
ACGCTCGACG CCATCGTTGC GCGCGCCGAG ACCAGACCGA TCGCGCCCGC CGATCCGGAG
AGCGGCGCCC GCGTGGCGTG A
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| Protein sequence | MALNLPQISL SVSIRNSLLT SVFLLLAILA GVSVLATMRL SALQDAVESI NRDRLPEIRA
LADLNVDVAH THLVAIRAAL STAAEPRAAA EQELRRRTTE VDAKIARFKE SIGDDAPMRM
AFDQFVNKWD MYQKQQAVML EPEVGANRDR LERVVNIETP PLFQAVVDAV EHGIRLADHR
ADSAINSATL DAQIFRWVLW SVNGVSIMIG LATLLFVIHD VSMPIFRITR SMEAIAKGEL
QTEIPYADHT NELGLMARAL AVFRASLVEN ERLNAATRTL SELSEWLQSA KSEPELYQMI
STVLGGLMPE CTGALYIYAD SRDVLEIAAE WNGSSTTRAL HPDDCWSLRR GHVYIHGTSE
VEFRCDHVHD GVNENYCCIP ILAHGETVGL LHVEYNSTGQ ETEAEAKARF ADRARLGLAC
AEHLSIAIAN VKLREGLRDQ SLRDALTGLN NRRYLIETAR RELLRAARSR TPVSVVTLDI
DHFKSFNDNH GHEAGDTVLR HIGEILKATF ADGEMPCRLG GEEFVVLLPN CTIEEAALRA
EELRARVEAL NISYGDGMLP RVTISVGVAA YPEAGIDLPE ILRVADGALY RAKQRGRNRV
ELASGGMVPP IDEMTSRAVA TLDAIVARAE TRPIAPADPE SGARVA
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