Gene BBta_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2280 
Symbol 
ID5150135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2362341 
End bp2362853 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID640557207 
ProductMarR family transcriptional regulator 
Protein accessionYP_001238363 
Protein GI148253778 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.421231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.627337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCGATA TAAATTGGGA CGGGGAGACC AAGTCGCGAG GCACGATGGC TGGCAAGACG 
ATGGAGCGCC CGGACGGCCC GGAGGTGAAG CTCGACGAGT TGCTGTGCTT CGGCATCTAT
GCCGCAGGTC ACGCCTTCAA CCGCGTTTAC AAGCAGCTGC TCGACGACCT CAACGTGACC
TACCCGCAAT ATCTGGTGAT GGTGCTGCTG TGGGAGCGGG ACGACCAGAC CGTTGGTGAG
CTCGGCTCGC GGCTGTTCCT GGAATCGAAC ACGCTGACGC CCTTGCTGAA GCGCCTCGAG
GCGCTCGGCT ACATCGCGCG GCGGCGTGAT CCCTCGGACG AGCGCCAGGT GCGGATCAGC
CTGACGGAGG CGGGCGCGGC ACTGCGCGCC AAGGCCGCGA CCGTCCCGGC CTGCATCCAG
GCCGCCTCCG GATTGACCGC GGCGCAGGCG CGGCAGTTGC TGAGCGGCGT GACGGCGTTG
CGCGCGGCGC TCGATAGCTA CGAGCCGGAG TGA
 
Protein sequence
MCDINWDGET KSRGTMAGKT MERPDGPEVK LDELLCFGIY AAGHAFNRVY KQLLDDLNVT 
YPQYLVMVLL WERDDQTVGE LGSRLFLESN TLTPLLKRLE ALGYIARRRD PSDERQVRIS
LTEAGAALRA KAATVPACIQ AASGLTAAQA RQLLSGVTAL RAALDSYEPE