| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2249 |
|---|
| Symbol | |
|---|
| ID | 5156179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2326840 |
|---|
| End bp | 2328138 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640557177 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238333 |
|---|
| Protein GI | 148253748 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.121683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTCCG GACATCGATA CCTCGGGCTC CTGTCGCGGT TTCGCCGCAA CGAGAGCGGG
AATATCGCGA TCATATTCGC GCTCGCATTG TTGCCGATCC TCACCTTCGT CGGCTCCGCG
ATCGACTATT CGATGGCGGT ACGTGCCAAG GCCAAGCTGT CCGCCTCGCT CGATGCGGCG
ATGCTCGCCG CAACAGGCTA TACCGCGATG CGCGGCACGG CGGCGGACGC CAAGACATCT
GCCACCAACA TGTACAATGG CCAGATGTCG TCGCATAAGC TGACCTCGAA CTCGCTGAAC
ATCACCGTCA CGGACAGCGT GACGGCGCGA ACCGTGACTG GCACGGCGTC GGTGGTCGTC
AATACGGCGT TCATGTACAT GTTCGGTTTT CCGACAATGA CCGTGACGGC CTCCTCGTCG
GCGTCGGCGT CGTTCCCGAC CTATATGGAT TTCTACGTCC TGGTCGACAA TTCGCCGTCA
CAGGGGCTCG GCGCAACCAC GGCCGACATG ACGACGCTGC AGAACGCGAC CTCTGACAAA
TGCGCCTTCG CCTGTCACGA TACTTACACA TCGAGCACGA AGAAGACGCT GCAGACCAAC
AGCTACTACC AGATCGCCAA GAACAAGGGC GTGACGATGC GGATCGACGT CGTCAGGTCG
GCAACGCAGT CGCTGACCGA TACGGCGACG TCGAGCCAGG TCGTCAGCAA CCAATATCGC
ATGGCGGTCT ACAGCCTGGG GAGCGATTGC GGCTCGCTGG GGCTGACGAC CGTCGCCAGC
CTGTCGTCGA GCATGTCGTC GGTGAAGTCC TCGGTCGGCG CGCTGGACCT GATGACCATC
CCCTATAGCG GCTACAACAA CGACATGTGC ACCGATTTCG ATGGTGCGAT GTCGGGTATG
AATGGCGTCA TCCCGGCGCA GGGCGACGGG TCATCGACCA GTCCGCAGAA ATGGCTGTTC
TTCGTCTCCG ATGGGGTCGC CGACTATTCC TATCCGACGA CGTGCAGCAA GACCGTGCTT
TCGGGCGGGC GCTGCCAGGA GCCGTTGAAC ACCACGACCT GCGACACGCT GAAGGCGCGC
GGCATCAAGA TCGCGGTGCT CTACACCACC TATCTCGCGA TCACCAACAA TAGCTGGTAC
ACGACCTATA TCGCGCCGTG GCGGGATTCG ATCAGCGGCA TCATGAAGTC GTGCGCCAGC
CCGGGCTATT ATTACGAGGT CGATTCCTCG GGCAGCATCG GCGCCGCGCT GACCGCGCTG
TTCCAGCAGG CCATCGCGTC GGCGCATCTG ACGAAGTAG
|
|---|
| Protein sequence | MLSGHRYLGL LSRFRRNESG NIAIIFALAL LPILTFVGSA IDYSMAVRAK AKLSASLDAA
MLAATGYTAM RGTAADAKTS ATNMYNGQMS SHKLTSNSLN ITVTDSVTAR TVTGTASVVV
NTAFMYMFGF PTMTVTASSS ASASFPTYMD FYVLVDNSPS QGLGATTADM TTLQNATSDK
CAFACHDTYT SSTKKTLQTN SYYQIAKNKG VTMRIDVVRS ATQSLTDTAT SSQVVSNQYR
MAVYSLGSDC GSLGLTTVAS LSSSMSSVKS SVGALDLMTI PYSGYNNDMC TDFDGAMSGM
NGVIPAQGDG SSTSPQKWLF FVSDGVADYS YPTTCSKTVL SGGRCQEPLN TTTCDTLKAR
GIKIAVLYTT YLAITNNSWY TTYIAPWRDS ISGIMKSCAS PGYYYEVDSS GSIGAALTAL
FQQAIASAHL TK
|
|---|
| |