Gene BBta_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2154 
Symbol 
ID5155246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2231651 
End bp2234011 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content65% 
IMG OID640557090 
Producthypothetical protein 
Protein accessionYP_001238246 
Protein GI148253661 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0411448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC CGATGCCGAA CCCGACGGGG GCGTCGTCCG AGGCGTTGCT CGAAGCGATG 
CAGGCGCCGC CGCCCGCTGC GGGGGCGCTG TCCTTCCGCA TGTTCCTGGC GTCGGTTCTG
GCCGCTGCCG CAACGGTCGT GGCGGTCGAG CTGCTGACGG ATCTGCAGAA GGATCGTATC
GTGTCGCTGC TGATGCTCGC CTTCGGCGCC GTGGTCGTCA TGATCGTCCT GACATCGATG
CTGATCCGCA AGAGCCGACA CGCCATCGCG CTCGCGAACG CACTGGCCCG GCAGAACGAT
CAGCTGGCGC AGACCACGCG GCTGCTGGGC GATGCGCAGC GGATCGGCAG GCTCGGCCAT
TGGGTGACCG ATCCCAGCGG CGAGTTCGCG GTGTGGTCCG ATGAGCTGTT CGAGATCGCC
GGACTGGAGC CGGTCGATCA GGTCGCCTTC GCCAAGATGC TCGACATCAT CCACCCGGAG
GATGTCGGAG CCTATGTGCG CGCGAGAGAC CGGTCGCGCG CGACCGGCTG CGCCTTCATC
CAGGAGCTTC GCTTCGTCAC GCCGAACGGC CAGGTCCGCT GGGTGAGGAT CGAGGCCAAT
GCCAGCGACG AAGCCGACGG CGTGTTTCGA GAGCGCTTCG GCATCGTGCA GGACATCACC
GAGCGCAAGC TCGCCGAGAT CAACGCGGAT CAGGCCCGGC TGCTGCTGAT GGATGCCATC
GAGTCGCTGA CCAATGGCTT CGTGCTGTTC GACAAGGACG ATCGTTTCGT GATGTCGAAC
ACGATGTTCC GCGAAATGTT TCCGGCCTGG ACCGTCCTGA TGAAGCCGGG CATCTCGTTC
ACCGAGCTGA TGCGACGGGC TTATGAGCAC GGGCTGATCC GGTCGAAGGG CGATCGCTTC
GAGGAGTGGC TCGCGCGCAA GACGGCCTGG CATCTCGGCG GCAGCCGGAT GATCGAGCAC
CGCGAACTCA ACGGCCGCTG GATCCAGAGC GTCGATCATC GCATCTCCGA TGGCGGAACG
GTCTGTTTGG TAACCGATAT CACCGCCTTC AAGACGGTTC AGGCCGAGCT CGAACAGAAG
CTTGCCTATG TCGAAGCCAT CCGCTCCGAT CTCGAGCAGC AGACGCAGGA GCTGGAGGCG
AGAGGGGCCG AGCTGCGCGC GGCGCGTGAC GCCGCGGAAG CCGCCAATCG GGCCAAGTCG
GATTTTCTGG CCATCATGAG CCACGAGATC CGGACGCCGC TCAGCGGCAT GGTCGGCATG
GTCGATCTGT TGCGCGGCAC CTCGCTCAGC GAGGAGCAGA AGCGGTACAC GGCGCTGGCC
AAGGAATCGG CGGACCTGCT GCTGGAGGTG ATCAACGACA TTCTCGATTT CTCGAAGCTC
GAAGCCGGGC GGCTGCAATC GGAATGTATC GATTTCGACG TTCCGAATCT GGTCGAGAGC
GCGGTCTCGT TCATGGGCGA GAAGGCGAGG AGGCGGGGCC TCGATCTCAA GGTCAGCCTC
GCGCCGGGCC TGCCGCAATA TCTCGAGGGC GATCCGACCC GCATCCGCCA GGTGATGCTG
AACCTGGTCG GCAATGCGAT CAAATTCACG GAGCAGGGCT CGATCGAAGT GCGCGCCTCG
CATCGCCAGC TGGATGGCGG CGTCGTCGAC CTCAGGATCG AGGTGATCGA TACCGGCATC
GGCATGTCGC CGGAGATCCT GGCGCAGATC TTCGATCCGT TCGTCCAGGC CGACACGTCG
ATCTCGCGCA AATATGGCGG CAGCGGTCTC GGGCTTGCGA TCTGCAGGCA GCTCTGCACC
ATCATGGGCG GCAGCATCGG CGTCGACAGC GAGCTCGGCC GCGGCAGCCG CTTCTGGTTC
GAGACCAAGT GCCGGTGCGG CGAGGCGCTG GCGCTGCCGG CCGAGACGGT CGTGGCGAGT
GTCGACCGCC CGCTGGACAT TCTGGTCGCC GAGGACAGCC CGATCATCGC GACCCTGATC
CAGAGCCTGC TGGTGAAGCA GGGGTTCAGG CCGACGATGG TGGTCAATGG CGCCGAGGCG
ATCGCTGCCA TCTCCGACAA GGTCTACGAT CTCGTCCTGA TGGACGTGCA GATGCCGGAG
ATGGACGGCA TCTCGGCCAC CAAGGCGATC CGTCAACTCC CGGGTCCCGA GCGCTGCGTT
CCGATCATCG CGCTGACCGC GAATGCGCTG GTCGGGCAAC GCGAAACCTA TCTGGCGGCG
GGCATGAACG ACTATGTGAC CAAGCCGATC CAGCCGCCGC TGCTGTTCGC CGCGATTCGC
CGCTGGGCGC TGCCGCAATA TGCCGACGCG CCGCCGCTGC AGGCAGGCGG CAACGGGCAG
CTCGAGATGT TCGTCTCCTG A
 
Protein sequence
MTPPMPNPTG ASSEALLEAM QAPPPAAGAL SFRMFLASVL AAAATVVAVE LLTDLQKDRI 
VSLLMLAFGA VVVMIVLTSM LIRKSRHAIA LANALARQND QLAQTTRLLG DAQRIGRLGH
WVTDPSGEFA VWSDELFEIA GLEPVDQVAF AKMLDIIHPE DVGAYVRARD RSRATGCAFI
QELRFVTPNG QVRWVRIEAN ASDEADGVFR ERFGIVQDIT ERKLAEINAD QARLLLMDAI
ESLTNGFVLF DKDDRFVMSN TMFREMFPAW TVLMKPGISF TELMRRAYEH GLIRSKGDRF
EEWLARKTAW HLGGSRMIEH RELNGRWIQS VDHRISDGGT VCLVTDITAF KTVQAELEQK
LAYVEAIRSD LEQQTQELEA RGAELRAARD AAEAANRAKS DFLAIMSHEI RTPLSGMVGM
VDLLRGTSLS EEQKRYTALA KESADLLLEV INDILDFSKL EAGRLQSECI DFDVPNLVES
AVSFMGEKAR RRGLDLKVSL APGLPQYLEG DPTRIRQVML NLVGNAIKFT EQGSIEVRAS
HRQLDGGVVD LRIEVIDTGI GMSPEILAQI FDPFVQADTS ISRKYGGSGL GLAICRQLCT
IMGGSIGVDS ELGRGSRFWF ETKCRCGEAL ALPAETVVAS VDRPLDILVA EDSPIIATLI
QSLLVKQGFR PTMVVNGAEA IAAISDKVYD LVLMDVQMPE MDGISATKAI RQLPGPERCV
PIIALTANAL VGQRETYLAA GMNDYVTKPI QPPLLFAAIR RWALPQYADA PPLQAGGNGQ
LEMFVS