Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2154 |
Symbol | |
ID | 5155246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2231651 |
End bp | 2234011 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640557090 |
Product | hypothetical protein |
Protein accession | YP_001238246 |
Protein GI | 148253661 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0411448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGC CGATGCCGAA CCCGACGGGG GCGTCGTCCG AGGCGTTGCT CGAAGCGATG CAGGCGCCGC CGCCCGCTGC GGGGGCGCTG TCCTTCCGCA TGTTCCTGGC GTCGGTTCTG GCCGCTGCCG CAACGGTCGT GGCGGTCGAG CTGCTGACGG ATCTGCAGAA GGATCGTATC GTGTCGCTGC TGATGCTCGC CTTCGGCGCC GTGGTCGTCA TGATCGTCCT GACATCGATG CTGATCCGCA AGAGCCGACA CGCCATCGCG CTCGCGAACG CACTGGCCCG GCAGAACGAT CAGCTGGCGC AGACCACGCG GCTGCTGGGC GATGCGCAGC GGATCGGCAG GCTCGGCCAT TGGGTGACCG ATCCCAGCGG CGAGTTCGCG GTGTGGTCCG ATGAGCTGTT CGAGATCGCC GGACTGGAGC CGGTCGATCA GGTCGCCTTC GCCAAGATGC TCGACATCAT CCACCCGGAG GATGTCGGAG CCTATGTGCG CGCGAGAGAC CGGTCGCGCG CGACCGGCTG CGCCTTCATC CAGGAGCTTC GCTTCGTCAC GCCGAACGGC CAGGTCCGCT GGGTGAGGAT CGAGGCCAAT GCCAGCGACG AAGCCGACGG CGTGTTTCGA GAGCGCTTCG GCATCGTGCA GGACATCACC GAGCGCAAGC TCGCCGAGAT CAACGCGGAT CAGGCCCGGC TGCTGCTGAT GGATGCCATC GAGTCGCTGA CCAATGGCTT CGTGCTGTTC GACAAGGACG ATCGTTTCGT GATGTCGAAC ACGATGTTCC GCGAAATGTT TCCGGCCTGG ACCGTCCTGA TGAAGCCGGG CATCTCGTTC ACCGAGCTGA TGCGACGGGC TTATGAGCAC GGGCTGATCC GGTCGAAGGG CGATCGCTTC GAGGAGTGGC TCGCGCGCAA GACGGCCTGG CATCTCGGCG GCAGCCGGAT GATCGAGCAC CGCGAACTCA ACGGCCGCTG GATCCAGAGC GTCGATCATC GCATCTCCGA TGGCGGAACG GTCTGTTTGG TAACCGATAT CACCGCCTTC AAGACGGTTC AGGCCGAGCT CGAACAGAAG CTTGCCTATG TCGAAGCCAT CCGCTCCGAT CTCGAGCAGC AGACGCAGGA GCTGGAGGCG AGAGGGGCCG AGCTGCGCGC GGCGCGTGAC GCCGCGGAAG CCGCCAATCG GGCCAAGTCG GATTTTCTGG CCATCATGAG CCACGAGATC CGGACGCCGC TCAGCGGCAT GGTCGGCATG GTCGATCTGT TGCGCGGCAC CTCGCTCAGC GAGGAGCAGA AGCGGTACAC GGCGCTGGCC AAGGAATCGG CGGACCTGCT GCTGGAGGTG ATCAACGACA TTCTCGATTT CTCGAAGCTC GAAGCCGGGC GGCTGCAATC GGAATGTATC GATTTCGACG TTCCGAATCT GGTCGAGAGC GCGGTCTCGT TCATGGGCGA GAAGGCGAGG AGGCGGGGCC TCGATCTCAA GGTCAGCCTC GCGCCGGGCC TGCCGCAATA TCTCGAGGGC GATCCGACCC GCATCCGCCA GGTGATGCTG AACCTGGTCG GCAATGCGAT CAAATTCACG GAGCAGGGCT CGATCGAAGT GCGCGCCTCG CATCGCCAGC TGGATGGCGG CGTCGTCGAC CTCAGGATCG AGGTGATCGA TACCGGCATC GGCATGTCGC CGGAGATCCT GGCGCAGATC TTCGATCCGT TCGTCCAGGC CGACACGTCG ATCTCGCGCA AATATGGCGG CAGCGGTCTC GGGCTTGCGA TCTGCAGGCA GCTCTGCACC ATCATGGGCG GCAGCATCGG CGTCGACAGC GAGCTCGGCC GCGGCAGCCG CTTCTGGTTC GAGACCAAGT GCCGGTGCGG CGAGGCGCTG GCGCTGCCGG CCGAGACGGT CGTGGCGAGT GTCGACCGCC CGCTGGACAT TCTGGTCGCC GAGGACAGCC CGATCATCGC GACCCTGATC CAGAGCCTGC TGGTGAAGCA GGGGTTCAGG CCGACGATGG TGGTCAATGG CGCCGAGGCG ATCGCTGCCA TCTCCGACAA GGTCTACGAT CTCGTCCTGA TGGACGTGCA GATGCCGGAG ATGGACGGCA TCTCGGCCAC CAAGGCGATC CGTCAACTCC CGGGTCCCGA GCGCTGCGTT CCGATCATCG CGCTGACCGC GAATGCGCTG GTCGGGCAAC GCGAAACCTA TCTGGCGGCG GGCATGAACG ACTATGTGAC CAAGCCGATC CAGCCGCCGC TGCTGTTCGC CGCGATTCGC CGCTGGGCGC TGCCGCAATA TGCCGACGCG CCGCCGCTGC AGGCAGGCGG CAACGGGCAG CTCGAGATGT TCGTCTCCTG A
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Protein sequence | MTPPMPNPTG ASSEALLEAM QAPPPAAGAL SFRMFLASVL AAAATVVAVE LLTDLQKDRI VSLLMLAFGA VVVMIVLTSM LIRKSRHAIA LANALARQND QLAQTTRLLG DAQRIGRLGH WVTDPSGEFA VWSDELFEIA GLEPVDQVAF AKMLDIIHPE DVGAYVRARD RSRATGCAFI QELRFVTPNG QVRWVRIEAN ASDEADGVFR ERFGIVQDIT ERKLAEINAD QARLLLMDAI ESLTNGFVLF DKDDRFVMSN TMFREMFPAW TVLMKPGISF TELMRRAYEH GLIRSKGDRF EEWLARKTAW HLGGSRMIEH RELNGRWIQS VDHRISDGGT VCLVTDITAF KTVQAELEQK LAYVEAIRSD LEQQTQELEA RGAELRAARD AAEAANRAKS DFLAIMSHEI RTPLSGMVGM VDLLRGTSLS EEQKRYTALA KESADLLLEV INDILDFSKL EAGRLQSECI DFDVPNLVES AVSFMGEKAR RRGLDLKVSL APGLPQYLEG DPTRIRQVML NLVGNAIKFT EQGSIEVRAS HRQLDGGVVD LRIEVIDTGI GMSPEILAQI FDPFVQADTS ISRKYGGSGL GLAICRQLCT IMGGSIGVDS ELGRGSRFWF ETKCRCGEAL ALPAETVVAS VDRPLDILVA EDSPIIATLI QSLLVKQGFR PTMVVNGAEA IAAISDKVYD LVLMDVQMPE MDGISATKAI RQLPGPERCV PIIALTANAL VGQRETYLAA GMNDYVTKPI QPPLLFAAIR RWALPQYADA PPLQAGGNGQ LEMFVS
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