Gene BBta_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2152 
Symbol 
ID5155244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2229992 
End bp2231296 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content66% 
IMG OID640557088 
Productputative response regulator, putative serine phosphatase 
Protein accessionYP_001238244 
Protein GI148253659 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA GCGCGCAGGG GGGCGAAGTG ACCTCCGAGG ACAGAATCCT GAGCGACGAC 
ATCACCGGCG CGAAGATCCT GATCGCGGAT GACGATCCGC TGTGTCGCCA GCTCGTCGCC
GGCGTCCTGC GGCAGCAGAA ATTCACCAGG TTGGAATTCG CCGATGGCGG CCGCTCGGCT
CTGGAGCAGG TCAGGAGCTT CCGGCCGGAC CTGATCCTGC TGGACATGCA GATGCCGGAT
CTGAACGGGC TGGACGTCTG CGGCCAGCTG CGCGCCGACC CCGACTTTGC CGACGTCCCG
ATCCTGCTGC AGACCGCGAC CGTCGACCGC AAGAAGATGG GAGAGCTGTT CTGCGGCGGT
GCCTCTGATT TCCTCTCCAA ACCGGTCAAT CCGTCCGAGC TGATCGCACG TGTCGTTGCG
CATATCGAGC GCTGGAACTC GTTGCGCGAG TTGCGCTTCT ATCGTGAGCG CATCTCCCGC
GAGCTCGAGG CGGCGCGGCG CATGCAGTTC GAGCTGCTGC CCGAGCCTGC GGCCTTGCAG
GAGGCGGCGC ACGCGCTCGG TCTGCGGATC GCGTCCTATA ATCGGCCGTC CTCGGAGCTC
GGGGGGGATC TCTGGGGCGT GCTCCCGATC GACGACGGAT CGTTTGGAAT CTTTCTGGCT
GATTTCACCG GCCATGGCGT CAATGCCGCC CTCAACACCT TCCGCCTGCA TGCGCTGATC
CACGAATACA AGGAGCTGCA CGGCGATCCG GGCGCGCTGG TCTCGATGCT CAATGAGCGC
CTGGTCCGGC TGCTGCGCAT CGGCCAGTTT GCGACATTCC TCTACGTCGT CGTGGATCAT
CAGAAAGGCG AGATCAGGTT CGCCTCCGCT GGCGCGCCGC CGGCGATCCT GGTTCAGGGC
ACGGCGGCGC GGGCCCGGCT GTGCGACACG AGCAGCCTTC CGCTCGGCAT CGAGCGAGGC
GTGCAATACC TCACCTCCAA GCGCAGATTT CCCGCCGGCT CGCTGCTTCT GCTGTTCAGC
GATGGCCTGC CCGAATTCCC GAATGCGAAG GGCCGCAGGA TCGGCGACAA GGGGCTGGTC
ACGGCGCTGA ACGCCTGTCC TGCCGGACTG ACGCCCAAGG AGGTGATCGA CCAGCTCTGT
GCCGCTGCAG GCATCACAGC GACCAGCCCG CTGCCCGACG ATACCACGAT CGTCTGTCTT
GACCGCCGCA TCGCGCCGCG GGCGACGCCG TGCGATGACG GCAGGGCCGT CCGCACGCCG
GCAGCCAAGC AGGTGCCGAC GAACCTGTCG AACGGAGCGC AGTGA
 
Protein sequence
MPLSAQGGEV TSEDRILSDD ITGAKILIAD DDPLCRQLVA GVLRQQKFTR LEFADGGRSA 
LEQVRSFRPD LILLDMQMPD LNGLDVCGQL RADPDFADVP ILLQTATVDR KKMGELFCGG
ASDFLSKPVN PSELIARVVA HIERWNSLRE LRFYRERISR ELEAARRMQF ELLPEPAALQ
EAAHALGLRI ASYNRPSSEL GGDLWGVLPI DDGSFGIFLA DFTGHGVNAA LNTFRLHALI
HEYKELHGDP GALVSMLNER LVRLLRIGQF ATFLYVVVDH QKGEIRFASA GAPPAILVQG
TAARARLCDT SSLPLGIERG VQYLTSKRRF PAGSLLLLFS DGLPEFPNAK GRRIGDKGLV
TALNACPAGL TPKEVIDQLC AAAGITATSP LPDDTTIVCL DRRIAPRATP CDDGRAVRTP
AAKQVPTNLS NGAQ