Gene BBta_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2073 
SymbolserA 
ID5151989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2148103 
End bp2149350 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content66% 
IMG OID640557010 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_001238166 
Protein GI148253581 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTAT CGCTGCCCAA GCAAAAGATC CGCGTTCTGC TCCTGGAGGG CGTGAACGAC 
TCGGCCGTCC GCATGTTCGA GGCCAACGGC TACACCGAGA TCGAACGGCT GCCCAAGGCG
CTCGGCTCGG CTGAACTGAA GCGCATGCTG TCCGGCGTGC ATATGCTCGG CATTCGCTCG
CGCACGCATC TGACCGAGGA CGTCCTGCAG GCCGCAGACC GGCTGATGGT GGTCGGCTGC
TTCTCGGTCG GCACCAACCA GGTCGATCTC GACGCCGCCA AGCGGCTCGG CATTCCCGTG
TTCAACGCGC CGTACTCGAA CACGCGCAGT GTCGCCGAAT TGACCATTGC CGAAGTCGTG
ATGCTGATGC GGCGCATCTT CCCGCGCTCG GTGGCGGCGC ATGCCGGCGG CTGGGACAAG
TCCGCCAATG GCAGCCGCGA GGTGCGCGGC AAGACGCTCG GCATCGTCGG CTACGGCAAT
ATCGGCTCGC AGCTGTCGAA CCTGGCCGAA GCCATGGGCA TGCGTGTGAT CTTCTTCGAT
CTCACCGACA AGCTGCGCCA TGGCAACACC GAGCCGGTCG AGAGCCTCGA TGAGCTGCTG
GCGATGAGCG ACGTCGTCTC GCTGCATGTG CCGGAGACGC CGGCAACCGC CAACATGATC
GGCGAGCGCC AGATCCGGCA CATGAAGGAC GGCGCCTATC TGATCAACAA TTCGCGCGGC
ACGGTCGTCG ATATCGAGGC GCTGGCCAGC GCGCTACGCG ACGGCAAGCT CGCTGGCGCG
GCGGTCGACG TCTTCCCCGT CGAGCCGGCC TCGAACGCTG ATCCCTTTGT GTCTCCGCTG
CAGGGCCTGC CGAACGTGAT CCTGACCCCG CATGTCGGCG GCTCCACGGA GGAGGCGCAG
GACCGGATCG GTGGCGAGGT CGCGCGCAAG CTGATCGACT ATTCCGACGT CGGCTCGACC
TTCGGCGCGG TCAACTTTCC GCAGGTGCAG TTGCCGGCGC GTCCGACCGG CACGCGCTTC
ATCCACGTCC ACCGCAACGT CCCGGGTGTG CTGCGCCAGG TCAACGAGGC GGTCTCGCGG
CACAACATCA ACATCCTCGC GCAATATCTG CAGACCGATC CCGAGGTCGG CTATGTCGTG
CTCGAAACCG ACGTGGTGGG CGGCGAGGGC GAGGAGCTGC TGTCGGAGCT GCGCGCTGTG
GAGGGCACGA TCCGCGTCCG CGTGCTGTAC GATCACGATC GGCCGTGA
 
Protein sequence
MPLSLPKQKI RVLLLEGVND SAVRMFEANG YTEIERLPKA LGSAELKRML SGVHMLGIRS 
RTHLTEDVLQ AADRLMVVGC FSVGTNQVDL DAAKRLGIPV FNAPYSNTRS VAELTIAEVV
MLMRRIFPRS VAAHAGGWDK SANGSREVRG KTLGIVGYGN IGSQLSNLAE AMGMRVIFFD
LTDKLRHGNT EPVESLDELL AMSDVVSLHV PETPATANMI GERQIRHMKD GAYLINNSRG
TVVDIEALAS ALRDGKLAGA AVDVFPVEPA SNADPFVSPL QGLPNVILTP HVGGSTEEAQ
DRIGGEVARK LIDYSDVGST FGAVNFPQVQ LPARPTGTRF IHVHRNVPGV LRQVNEAVSR
HNINILAQYL QTDPEVGYVV LETDVVGGEG EELLSELRAV EGTIRVRVLY DHDRP