Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1996 |
Symbol | hupS |
ID | 5152130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2063270 |
End bp | 2064361 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640556937 |
Product | uptake hydrogenase small subunit precursor |
Protein accession | YP_001238093 |
Protein GI | 148253508 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGA CGACAGAAAC CTTTTACAGC GTCATCCGGC GCCAAGGCAT CACGCGGCGC AGCTTCCATA AATTCTGCAG TCTCACCGCG ACGAGCCTCG GGCTCGGGCC GGTCGCTGCC AGCCGCATCG CCAATGCGCT GGAGACCAAG CCGCGCACGC CGGTCATCTG GATGCACGGG CTGGAATGTA CCTGCTGCTC GGAGAGCTTC ATCCGCTCGG CGCATCCCCT GGTGAAGGAC GTCGTGCTGT CGATGATCTC GCTCGACTAT GACGACACGA TCATGGCGGC GGCCGGACAG CAGGCCGAGG AGATCCTCGA GGAGACGCGC GCCAAGTACA AGGGCCAGTA CATCCTCGCC GTCGAAGGCA ATCCGCCGCT CAACGAAGGT GGCATGTTCT GCATCGACGG CGGCAAGCCG TTCGTCGAGA AGCTGAAGGT GATGGCCGAG GATGCGATGG CCATCATCGC CTGGGGCGCC TGTGCGTCCT GGGGCTGCGT GCAGGCCGCC AAGCCCAATC CGACGCAGGC CACCCCGATC GACAAGGTCA TAACCAACAA GCCGATCATC AAGGTGCCGG GCTGTCCGCC GATTGCCGAG GTGATGACCG GCGTCGTCAC CTTCATCACC ACCTTCGGCA AATTGCCCGA GCTCGACCGC CAGGGCCGGC CGAAAATGTT CTACTCGCAG CGCATCCACG ACAAATGCTA TCGCCGGCCG CATTTCGATG CCGGCCAGTT CGTCGAGGAG TGGGACGACG AAGCTGCGCG CAAGGGCTAC TGCCTCTACA AGATGGGCTG CAAAGGCCCG ACCACCTACA ACGCCTGCTC GACGGTGCGC TGGAATGGCG GCGTGTCGTT CCCGATCCAG TCGGGGCACG GCTGCATCGG CTGCTCCGAG GACGGCTTCT GGGACAAGGG TTCGTTCTAC GACCGGCTCA CCACCATCAA GCAGTTCGGC ATCGAGCGAA ATGCCGACCA GATCGGCATG GTCGCGGCGG GCACGGTCGG AGCTGCGGTC GCGGCGCATG CCGCAGTGAC GGCCGTCAAA CGACTCGCGA CCAAGCGCGA CGACGCCAAG CAAGACCATT AA
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Protein sequence | MGATTETFYS VIRRQGITRR SFHKFCSLTA TSLGLGPVAA SRIANALETK PRTPVIWMHG LECTCCSESF IRSAHPLVKD VVLSMISLDY DDTIMAAAGQ QAEEILEETR AKYKGQYILA VEGNPPLNEG GMFCIDGGKP FVEKLKVMAE DAMAIIAWGA CASWGCVQAA KPNPTQATPI DKVITNKPII KVPGCPPIAE VMTGVVTFIT TFGKLPELDR QGRPKMFYSQ RIHDKCYRRP HFDAGQFVEE WDDEAARKGY CLYKMGCKGP TTYNACSTVR WNGGVSFPIQ SGHGCIGCSE DGFWDKGSFY DRLTTIKQFG IERNADQIGM VAAGTVGAAV AAHAAVTAVK RLATKRDDAK QDH
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