Gene BBta_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1992 
Symbol 
ID5151837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2057953 
End bp2059269 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content69% 
IMG OID640556933 
Producthypothetical protein 
Protein accessionYP_001238089 
Protein GI148253504 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGA CAATTGCTCT CGTCTTAGCC GTGTGGCTCG CCGCCATTGT GCCCGGTTCG 
GCCGCCGAAC TCGAGGAGGC CGTGGCCGCG GCGGCCAATG GCCAGCACGC CATGGCGATG
CGGCGGCTGA TGCCGCTGGC GGCCAAAGGC GATGCGCGGG CGCAGTTCGA TGTCGGCTTC
ATGCAGGCGT TCGGCTGGGG TGTGCCGCGC AACCCTGCCG AGGCGATGGC CTGGTACCGG
AAGGCGGCGG ATCAGGGCCT CGCCGTCGCG CAGCATTATC TCGGCGTCGC CTATTACAAT
GGCGAAGGCG TCGCCCGCGA TCATGGCGAA GCCAGCCGAT GGTTTTCTCG CGCCGCGGCC
CAGGGCTTCG CCCAGTCGCA ATATATGCTC GGCCTGATGA TGCTCGACGG GCGGGTGGTC
GCGCAGGATG TCGTGCAGGG CTATGCCTGG CTGGTCATGG CGGGGCGAAA TGGCGTGCGG
TCCGCGGGCC GCGAGGTCCA GCGTGTCGCG TTGAGTGAGG CGCAGCGGCG ACAGGCGGAG
CAGGCCATCG CGGCCTGGCG GCCCAAGCCG GAAGCGGCCG ATTCAGGCAT TGCCAATCCG
CGGCCCGAGC AACTGCTCGG GCTCGACCGG CACATCGGCG AGGTCGTGGA TCCCACGGCG
TGGCCGGCAT CATCGATCGG CGTCGTCACC GTGGCCCAAT ACAGCACGGG CGGTTCGTGC
ACGGGCACGC TGGTGGCGCC GCGCCTGGTG CTCACGGCCG CGCATTGCGT CTTCAACGGC
GTCGCCCAGG TCAGTCCCGG CAACGTCCAC TTCCTGGCCG GCATGAACAA GGGCACGCCG
GCAGCCTCGT CGATTGCCGA CAAGCTGATC GTGGCGCCGG ACTTCGCGCC GATCCAGCAC
GACAAATGGT CGCTTGACCG CTCGCGCGCC GATTGGGCCC TGATTGTCCT GAAGGATGCG
CTGCCGTCGC GGCCGGTGGC GGTCACAGCG CTCACGCGCG AGCAACTTGC GGCGGCGACG
GCGGCCGGGA CGATTTCGGA GATCGGCTAC GGCCAGGAGC GGCGTTATTC GCCGACCGGA
CAGCGCAATT GCAGCGCCGG CATGACTGAG GATGCTCGGC TGCTGACGGT GCATTGCTTG
GCGAATTTCG GCTATTCGGG CTCGCCGATC CTGGCCGAGA TCGGCGGCGA GACGGTCGTC
GTCGGCATCT TCTCGGCGTT CCATGAGGAG ACCCGGCTGA TGTTCGCCGC GCCGGCCAGC
GGGTTCGAGG CCGCTGTCAG GCGCGAGATC GCGGCGCAAA GCGCCTCGGT CCGGTGA
 
Protein sequence
MIRTIALVLA VWLAAIVPGS AAELEEAVAA AANGQHAMAM RRLMPLAAKG DARAQFDVGF 
MQAFGWGVPR NPAEAMAWYR KAADQGLAVA QHYLGVAYYN GEGVARDHGE ASRWFSRAAA
QGFAQSQYML GLMMLDGRVV AQDVVQGYAW LVMAGRNGVR SAGREVQRVA LSEAQRRQAE
QAIAAWRPKP EAADSGIANP RPEQLLGLDR HIGEVVDPTA WPASSIGVVT VAQYSTGGSC
TGTLVAPRLV LTAAHCVFNG VAQVSPGNVH FLAGMNKGTP AASSIADKLI VAPDFAPIQH
DKWSLDRSRA DWALIVLKDA LPSRPVAVTA LTREQLAAAT AAGTISEIGY GQERRYSPTG
QRNCSAGMTE DARLLTVHCL ANFGYSGSPI LAEIGGETVV VGIFSAFHEE TRLMFAAPAS
GFEAAVRREI AAQSASVR