Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1960 |
Symbol | |
ID | 5151682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2024858 |
End bp | 2025529 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640556903 |
Product | putative urease accessory protein UreF |
Protein accession | YP_001238059 |
Protein GI | 148253474 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.702591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCGT TGTTGCGCGC GATCTGGCAG GCCGATGCGG CGTTTCCAAG CGGTGCCTTT GCCTTCTCCT ACGGCATCGA AGGAGCGCTG GCGTTGCGCC CCGACATGAG CCTGGGCGAG TTCGAACGTC TCTGCGCCGC GGTGCTGCAG CAGCGCTGGG CAAGCTATGA TCGGATCGCG CTGCAACGGG CGTTTCGCGC CGGCAGGGAT CTCGATGCGT TGGCCGCGGT GGATCGGGAG ATCGAGGCCT CCACCATGAT CGAGGCGCTG CGCGCCGGTT CGCGCCGCAA TGGCGCGTCA TTTCTGGCGG CGCATGCGCG GCTCGGACAG CCGCTTGCGC TCAAGCTGCG CGCGCAGGTG AAGGCCGGTG ACTGCCTGGG GCATATCGCC GTGATGCAGG GCGCCATATG GGCGGCGCTG CAGCTCGATG AGCAGCACGC CGCCTTGTGC TCGGCCTACA CGGTGGCGTC CGGCCTCATC ACCGCGGCGG TGCGGCTCGG CGCCGTCGGC GCCCTGCAGG GGCAAAGCGT GCTGCAGGCG CTGCTGCCGC TGATCGATGC CCTGGTCGCA ACTCCGCTCG ACGACGACGC CGAGCTCGAA AGCTTCATCC CCATCCTCGA CATTGCGGCC GCGCGCCATG TCCACGCCGA ATTGCGGCTG TTCGCCAATT GA
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Protein sequence | MLPLLRAIWQ ADAAFPSGAF AFSYGIEGAL ALRPDMSLGE FERLCAAVLQ QRWASYDRIA LQRAFRAGRD LDALAAVDRE IEASTMIEAL RAGSRRNGAS FLAAHARLGQ PLALKLRAQV KAGDCLGHIA VMQGAIWAAL QLDEQHAALC SAYTVASGLI TAAVRLGAVG ALQGQSVLQA LLPLIDALVA TPLDDDAELE SFIPILDIAA ARHVHAELRL FAN
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