Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1847 |
Symbol | |
ID | 5151791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1917968 |
End bp | 1919233 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640556799 |
Product | putative efflux transporter |
Protein accession | YP_001237956 |
Protein GI | 148253371 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGATC AAACTGCAGC CCTCCCACGT CAGAAAGCCA GCTCGCTGTC CGCTCTCGGG TCCGTCGTCT GGGCGCACCG CTGGTTCGTC CTTGCCGTTA TGCTGTTGCT TGGCTTCGGC GGCTGGCAGA GCGTGCGTGC GGTCCTTGGT CCAGCGGTGG TGGTTGATCT GGTCCGGCGT GGTGATCTGG TCGAGACTGT GGTCGCCAGC GGCCATGTCG AGACGCCCTA TCGCGTCGAG ATCGGCAGCC AGATCACCGG AACCGTTGAC GACGTACTGG TGCAGGAAGG GCAGCGTGTC ACCAAGGGCC AGCCTCTGAT CTCGCTCGAG GCGCGCGAAC TGAAGGCCGC CGTGCTGCAG GCGCAGGGCG CCGTCGCGCA GGCGGAGGCG CGCATGCGCC AACTCGCCGA GCTGACCTTG CCGTCGGCCA AGGAAGCGCT GCGTCAGGCG CAGGCGACCC TGCTCAATGC CCAGCAAACC TACGACCGTA CATCGCAACT GGCCAGCAAT GGCTACGCCA CCCGGGCTGC GCTCGACGAG GCGCAGAAGA CGCTCGATGT GGCTCTGGCG CAGAAGCGCG CGGCCGAGTT TCAGGTGTTC ACGGCGAGTC CCGGCGGCAG CGACTCCGTG ATGGCCGAGA CCCAGCTCAA CCAGGCGCGC GCCAATCTCG ACACGGCGCA ATCCCGTCTC GGTTACGCCA CCATTCTGGC CCCGCGCGAC GGTGTATTGA TCACGCGCAA CGTCGAGAAG GGCGCCGTGG CGCAGCCCGG CAAAGCGCTG CTGGTGCTGG CGCCGGCGGG AGACGTCCAA CTCGTGCTGC AGATCGACGA GCGCAATCTC GGCAAGCTGG CGCTGGGCCA GACCGCGCTG GCCTCGGCCG ACGCCTATCC CGACCGGCGC TTCGCTGCGG TCGTCAGCTA CATCAATCCC GGCGTCGATA TCTCCCGCGC CTCCGTGCAG GTCAAGCTGA CCGTCAAGGA TCCGCCGGAT TATCTGCGCC AGGACATGAC GGTGTCTGTC GACATCGAGG TTGCGGCTCG TCGGGATACT CTGGAGCTGC CGGTGCGTTC GGTTCATGAC CTCACCTCGG GCCAGCCCTG GGTGCTCGGC GTCAAGGACG GTCGCGCGGC CAAGATTCCG GTTCGCGTCG GCATCCGCGG CAACAGCCAT GTCGAGATCG TCGCTGGCTT GAGCGCCGGG GATGTCGCGG TTCCCCAGAG TTCCGGCGTC GTGACCGGCC AGCGTTTCCG TGCGGTGCTG CCGTGA
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Protein sequence | MVDQTAALPR QKASSLSALG SVVWAHRWFV LAVMLLLGFG GWQSVRAVLG PAVVVDLVRR GDLVETVVAS GHVETPYRVE IGSQITGTVD DVLVQEGQRV TKGQPLISLE ARELKAAVLQ AQGAVAQAEA RMRQLAELTL PSAKEALRQA QATLLNAQQT YDRTSQLASN GYATRAALDE AQKTLDVALA QKRAAEFQVF TASPGGSDSV MAETQLNQAR ANLDTAQSRL GYATILAPRD GVLITRNVEK GAVAQPGKAL LVLAPAGDVQ LVLQIDERNL GKLALGQTAL ASADAYPDRR FAAVVSYINP GVDISRASVQ VKLTVKDPPD YLRQDMTVSV DIEVAARRDT LELPVRSVHD LTSGQPWVLG VKDGRAAKIP VRVGIRGNSH VEIVAGLSAG DVAVPQSSGV VTGQRFRAVL P
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