Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1830 |
Symbol | |
ID | 5151776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1897062 |
End bp | 1898195 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640556782 |
Product | SoxB protein |
Protein accession | YP_001237939 |
Protein GI | 148253354 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.01775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.260331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA ACACGGATGC CATCATCGTG GGTGGCGGCA TCCACGGCTG CTCGACCGCG CTGCATCTCT GTCTCGCCGG CTTGAAGCCG GTGCTGATCG AAAAGGACTA TGCGGGCCGC CACGCCTCCG GCGTCAATGC CGGCGGCGTG CGCCAGCTCG CGCGCGACGT CGCCGAGATT CCGTTGTCGA TCCGGTCGAT GGGAATCTGG GAGAGCATCG CCGCACTGGT CGACGATGAT TGCGGCTTCG AAAGCCATGG CCAGGTGCTT GTCGCGGAGA ACGCGGCCGA GCTCGCCGCC TGCCGTGAGC GGGTCGCCGA TCTCAACGCG CGCGGCTTCA GCCATGAGGA GCTGATCGAC AGCGCCGAGC TGCGCCGGCT GGTGCCGGCG GTGGCAGAGA GCTGTCCTGG CGGGATCGTC TCGCGCCGTG ACGGTGCGGC ACAGCCCGCC AGGACCACGA CGGCGTTTCG CCGCAAGGCC GAGCAGCTCG GCGCCATCAT CCGCGAGGGC GTGACCGCCA GCAACATCCG CAAGGAGGAT CGGCTCTGGC GCGTCGATGT CGGCGATGAC ACCTATGCCG CCCCCATTCT GGTCAATGCC GCCGGCGCCT GGGGCGGCCG CATCGCCGCC GGGCTCGGCG AGCCCGTGCC GGTCACGACC GTGGCGCCGA TGCTGATGAT CACCTCGCCG GTCCCGCACT TCATCGATCC CGTGGTGATC CTGCGCGGCC GCAAACTGTC ATTCAAGCAG TTCAAGAACG GCACCGTACT GATCGGAGGC GGCCATCTCG CGGCGCCGGA TCAGGATCGC AACGAGACGG TGCTCGACTG GCGCAGCCTC GCCATCAGCG CGCGCACCGT GTTCGAGCTA TTCCCGGTGA TGCGCAGCGC CACCATCATG CGGGCCTGGG CCGGCATCGA GGCGCGCATG CAGGACGACA TCCCGGTGTT CGGGCCAAGC GCCGTGCATG AGGGCCTGTT TCACCAATTC GGCTTTTCGC TGCATGGCTT CCAGCTCGGC CCCGGCGCGG GCGCCGTGAT GGCCGAACTG ATCGTGCATG GCGGCACGCA GACCCGGATC GGAGAGCTCA GCATCGAGCG CTTCCGCAAC GCTTCCCCTT CAGCAACAGC ATGA
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Protein sequence | MTINTDAIIV GGGIHGCSTA LHLCLAGLKP VLIEKDYAGR HASGVNAGGV RQLARDVAEI PLSIRSMGIW ESIAALVDDD CGFESHGQVL VAENAAELAA CRERVADLNA RGFSHEELID SAELRRLVPA VAESCPGGIV SRRDGAAQPA RTTTAFRRKA EQLGAIIREG VTASNIRKED RLWRVDVGDD TYAAPILVNA AGAWGGRIAA GLGEPVPVTT VAPMLMITSP VPHFIDPVVI LRGRKLSFKQ FKNGTVLIGG GHLAAPDQDR NETVLDWRSL AISARTVFEL FPVMRSATIM RAWAGIEARM QDDIPVFGPS AVHEGLFHQF GFSLHGFQLG PGAGAVMAEL IVHGGTQTRI GELSIERFRN ASPSATA
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