Gene BBta_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1829 
Symbol 
ID5151775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1896707 
End bp1897054 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content62% 
IMG OID640556781 
Producthypothetical protein 
Protein accessionYP_001237938 
Protein GI148253353 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000709548 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.28873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA CCCGCAAGAT CCGCTCGGCC ATCCATCACC GCATCGTCGA AGCCAATGGC 
TTCGTCTTCA TCGGCGGCAC CATCGCCGAC GACACATCGG TGTCGATGGG CGAGCAGACC
CGCAACATCC TCGGCAAGAT CGACGGCTTT CTGAAAGAGG CCGGCACCGA CCGGTCGCGT
GTCGTCTCCG GCCAGATCTT CGTGACGGAC TTGTCGAAGA AGAAGGAGAT GGATGCTGCC
TGGACCGAAT TTTTCGGCGA GGATCTGCCG ACCCGTGCCA CCGTCGGCGT TGCCGATCTC
GGCGGTGGCG CGCTGATCGA AATCGTGGTG ACCGCGGTCA AGGGCTGA
 
Protein sequence
MTITRKIRSA IHHRIVEANG FVFIGGTIAD DTSVSMGEQT RNILGKIDGF LKEAGTDRSR 
VVSGQIFVTD LSKKKEMDAA WTEFFGEDLP TRATVGVADL GGGALIEIVV TAVKG