Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1828 |
Symbol | |
ID | 5151774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1895003 |
End bp | 1896622 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640556780 |
Product | hypothetical protein |
Protein accession | YP_001237937 |
Protein GI | 148253352 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00860183 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.522901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGACG CGCGGCGGAG AGCAACGGAG GTCTCGGTCT ACCAGATGCA ATATCTGTCT TTCGCCTCGT GCATCACGCG GCATTCGCTT CGACCGGCGG TGTTGTCCGC CGTCATCATC GCCGCACATG CGAGTGGGGC CGCCGCGGCC GACAGTGTGA ACGTGGTCCG CGAGCTGGCC GGCCGTGTCG GCCCGATCCT CGGTTCTGCC CAGGCCTGCA CCAGCATCGC GACACGCCGC GTTCAAGTGA TGCTCGGCAA GTTTCAGCAG GCGATCCGCG AGGCCTCGGC CAACCCGAAC GACCGCAACG AGCTGGCCCG CGAGTTCGAG AAGAACATCG CCGATGGCCG GACTGCGGTG AATCGTGGAC GGGCCGATTG CAGGCTGGTC GAACGCCAGC TCGCCGATCT CGAAGGAAGC GTCGGCGCGC CGCCGGCGCC GACCGCCGCG CCGCTCGCCG GCAATGCGGC CAGCCCTGCA CGGCCGGCCG CTGCTGGCCA AGTGCGAGGC GTGACCGATC AGGAAATCCG CTTCGGAATG GTGATCCCCT ACACGGGAAG CGCCAAGGAG AACGGGCAGA GCTACAAGCG CGGTATCGAG GTGGCGTTCG CGCGGGCCAA TGCCGGCGGC GGCGTCCATG GCCGGACGCT CAAGCTGATT GCCGCCGACG ATGGTTTCGA ACCGACGCGG ACCTTGGACG CGATGAAGCT GCTTTGGGAC AAGGAGCAGG TGTTCGGCTT TCTCGGCAAT TTGGGCACGC CGACCGCGGC GGTCGCCGTG CCATTTGCGC TCGAGCGCAA GGTGCTGTTC TTCGCGCCGT TCACCGGCGG CAGCGTGGTG CGGCACGATC CGCCGGACCG TTATGTCTTC AACTACCGGC CGAGCTTCGT CGAGGAAGCC GACGCCGCGG TGCGCTATCT CCTGAAGATG CGCAAGATCA GGCCGAACCA GATCGCCGTG TTTGGCCAGA ATGACGATCT GGGCGAGCAG GGCTTCGCCG GTGTCGCCAA GGCCTATCGT GCCGCCGGTC TCAACGACTC GACGATCCTG CGGCTGGTCT ATAACCGCAA CTCCATCGAC ATGGACGAGG CGGTCGCCCA GTTGAAGCAG CAGAGGGTGC CGATCAAGGC GATCGTGATG GTCGGCACCA CGCGCCCGGC GGCGAAATTC ATCGAGAAGA CGCGCGATCT GTTTCCCGGC ATGATCTACA CCAACATGTC GATCGTCGGC GCCACGGCGC TGGCGCAGGA ATTGATGCTG CTGGGACCGC GCTTCACCGA GAATGTCATC GTGACGCAGG CCGTGCCGGC CGTCTCCGGC TATTCGAGCA CCGTGCTCGA ATTCAAAACG GCGCTGGCCC AGGTGGCGCC CGGCGAGGTG CCGGACTACA TCTCGCTCGA AGGCTATATC GCGGCGAACC TGCTGATCGA CGCGCTGAAG CGCTGCGGAC CGCAGCTCGA CACCGAACGC CTGGTGGAGA CGCTGGAGAG CACGCGGAAT CTCGACATGG GGCTCGGCGC CGCGCTCAAT CTGAGCCGCG GCGATCACCA GGCCCTGCAC AAGGTCTGGG GCACCCAGCT CGACAAGACG GGCGTCTATC AGCCGATCGA TCTGGAATGA
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Protein sequence | MRDARRRATE VSVYQMQYLS FASCITRHSL RPAVLSAVII AAHASGAAAA DSVNVVRELA GRVGPILGSA QACTSIATRR VQVMLGKFQQ AIREASANPN DRNELAREFE KNIADGRTAV NRGRADCRLV ERQLADLEGS VGAPPAPTAA PLAGNAASPA RPAAAGQVRG VTDQEIRFGM VIPYTGSAKE NGQSYKRGIE VAFARANAGG GVHGRTLKLI AADDGFEPTR TLDAMKLLWD KEQVFGFLGN LGTPTAAVAV PFALERKVLF FAPFTGGSVV RHDPPDRYVF NYRPSFVEEA DAAVRYLLKM RKIRPNQIAV FGQNDDLGEQ GFAGVAKAYR AAGLNDSTIL RLVYNRNSID MDEAVAQLKQ QRVPIKAIVM VGTTRPAAKF IEKTRDLFPG MIYTNMSIVG ATALAQELML LGPRFTENVI VTQAVPAVSG YSSTVLEFKT ALAQVAPGEV PDYISLEGYI AANLLIDALK RCGPQLDTER LVETLESTRN LDMGLGAALN LSRGDHQALH KVWGTQLDKT GVYQPIDLE
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