| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1657 |
|---|
| Symbol | |
|---|
| ID | 5154172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1730412 |
|---|
| End bp | 1730990 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640556615 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237773 |
|---|
| Protein GI | 148253188 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.459184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCACC TCGCGCAGGC GCAGGCTGAA CCTCGCGCGG GGGTCAAGCC GAAACCGCCC
GAGGCTCCTG CCAAGCTGCC GAAGGTCGGG GCCGATAAGA CCAAGGGGCT CGATTTCCTG
TTCGGCGCGC TCAAGGCGGC CCCGGATGAC GTCAGCGCCA AGCACGTCGA AGCGCGGATC
TGGGCAATCT GGCTGCAAAC CCCGAGCGAC ACCGTCGCCT TGCTGATGTC ACGCTCGAAG
GCCGCGATGG ATGCGCGGCA GAATGAGGTG GCGCTGAAGC TGCTCGATTC CGTCATCAAG
CTCCGGCCCG ATTATGTCGA GGCTTGGAAC CGGCGCGCCA CAATCTATTA CCTGCAGAAT
GACTACGGTC GCTCGCTCGC TGACATCCAG CAGGTGCTGC TGCGGGAGCC GCGGCATTTC
GGCGCGCTGG CCGGCCTCGG TATGATCATG CAGGATCTCG GCGAGGAGAA GCGGGCGCTG
GATGCCTTCC GCAAGGCGCT CGACGTCAAT CCTCACCTGG AGAAGGTGCC TGACCTGGTC
AAGACCCTGA CCGAAAAGGT CGAAGGCCGC GATATCTAG
|
|---|
| Protein sequence | MPHLAQAQAE PRAGVKPKPP EAPAKLPKVG ADKTKGLDFL FGALKAAPDD VSAKHVEARI
WAIWLQTPSD TVALLMSRSK AAMDARQNEV ALKLLDSVIK LRPDYVEAWN RRATIYYLQN
DYGRSLADIQ QVLLREPRHF GALAGLGMIM QDLGEEKRAL DAFRKALDVN PHLEKVPDLV
KTLTEKVEGR DI
|
|---|
| |