Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1616 |
Symbol | |
ID | 5153672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1690313 |
End bp | 1691182 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640556578 |
Product | hypothetical protein |
Protein accession | YP_001237736 |
Protein GI | 148253151 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.057231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGGTG CCGCTGGCCA GCTCGGCCGC GCCGTAATCC GCCACCTGCT GACCACCTTG AAGGTGCCGG CCGGCAGCAT CATCGCCGCG ACGCGCAAGC CAGAGCAGTT GAAGGATCTG GCTGCCCAGG GCGTCCAGGT CCGCGCGGCC GATTTCGACG ATCCGCAATC GCTGCCTGCC GCCTTTGCCG GCGTTGGCCG CATGCTGCTG ATCAGTACGG ACAGGCTCGA TCGTCCCGGT TATCGCGCCG AACAGCATGG CCGCGCCATC GCGGCGGCCG AGCAGGCCGG TGTCGGCCAT GTCGTCTACA CGTCGATGCC GAAGCCCGAC AACTCACCGT TGTTGATCGC GCCCGACCAC GCTCGCACCG AGGCTGCGCT GCGCGACAGC AAGCTCGCCG GCTGGACCGT GCTGCGCAAT CACTGGTACT TCGAGAACCT GTTGATGTCG CTGCCCCAGA TCCTCGGCTC CGGCCGCTGG TTCACCGCGG ACGAGGGCGG CGCGTCAGCC GACATCGCGC GGGACGACCT CGCGCGGGCC GCGGCGGTGG TGCTCGCCGG CAATTTCAGC GGCAAGAGGG CGTTCACGCT GAGCGGTGGA CAGGCGCTGA CCAAGGCCGA GATCGCGCGC ATCCTGTCCG CGGCCACCGG CAAGCCGATC GAGGTCGTGC AGGTGCCGCT GCCGGGATTG ATCCAGGGCA TGGTCGGCGC GGGACTGCCG CAGCCGCTGG CCGAAATCTT TGCGTCGTTC GACACCAACA CCGCGCAAGG CCGCGTGGCC GAAGTGACCG GCGATTATCA GGCGATCACC GGTGTCGCGC CGCAGAGCTT TGCTGATTGG GTCGAAAAGA CCAAGGGCGC CTTCGCCTGA
|
Protein sequence | MTGAAGQLGR AVIRHLLTTL KVPAGSIIAA TRKPEQLKDL AAQGVQVRAA DFDDPQSLPA AFAGVGRMLL ISTDRLDRPG YRAEQHGRAI AAAEQAGVGH VVYTSMPKPD NSPLLIAPDH ARTEAALRDS KLAGWTVLRN HWYFENLLMS LPQILGSGRW FTADEGGASA DIARDDLARA AAVVLAGNFS GKRAFTLSGG QALTKAEIAR ILSAATGKPI EVVQVPLPGL IQGMVGAGLP QPLAEIFASF DTNTAQGRVA EVTGDYQAIT GVAPQSFADW VEKTKGAFA
|
| |