Gene BBta_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1587 
Symbol 
ID5153113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1664517 
End bp1665032 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content63% 
IMG OID640556549 
Producthypothetical protein 
Protein accessionYP_001237707 
Protein GI148253122 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.778072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.575549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGCT TACCTAGCTG GAGCAGAGCC ATGGAACTCA CCGTGGTGCC TATCGTCAAG 
CCAGACGCCG CCAACTTCAT CTTCGGCCAG TCGCATTTCA TCAAAACCGT GGAAGACCTC
CACGAGGCGC TGGTGGGCGC GGTTCCGGGC ATCCGCTTCG GGCTGGCCTT TTGCGAGGCC
TCCGGCAAGC GGCTGGTCCG CTGGTCAGGT AATGACGAAG CCGCCCTCGC GCTCGCACGC
GGCAACGCAT TGGCGATCGG CGCCGGCCAC ACGTTCCTGA TCTTCCTGGG CGACGGGTTT
TTTCCCGTCA ACGTTCTGAC TGCAGTGCGC GCGGTGCCGG AAGTCTGCCG TATCTATTGC
GCGACAGCTA ACCCGACCCA AGTGATCATC GCGCAGACGG AGCTGGGCCG GGGCGTGCTC
GGCGTGGTAG ATGGCGCCTC GCCGTTGGGT ATCGAAACCG ACGCCGACAT TGCGTGGCGG
AAAGACCTGC TGCGAAAGAT CGGCTACAAG CTGTAG
 
Protein sequence
MHSLPSWSRA MELTVVPIVK PDAANFIFGQ SHFIKTVEDL HEALVGAVPG IRFGLAFCEA 
SGKRLVRWSG NDEAALALAR GNALAIGAGH TFLIFLGDGF FPVNVLTAVR AVPEVCRIYC
ATANPTQVII AQTELGRGVL GVVDGASPLG IETDADIAWR KDLLRKIGYK L