Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1543 |
Symbol | |
ID | 5152933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1622965 |
End bp | 1623741 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640556507 |
Product | putative outer-membrane protein |
Protein accession | YP_001237665 |
Protein GI | 148253080 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.403441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.192756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGGCG CAGCAGGGCT CCTGGCGGCC GGCCTTGTCG CGAGTCCTTC GTTCGGCGCC GACCAGACGG AACGGGTGTA CTACAATTAC AGCCGGCCGA AGCCGGTGTT CGAGCCCAAT TACGACTGGA GCGGCTTCTA TGTCGGAGTC AACGTCGGCG GCGGTAAAGC CCACGCCTGC TGGGATGATG CCTTCAGCTT CGGTGTCTTG AACAGCCCAG CTATTTCCGA GGGATGTCAC AGCACGTCGG GCGCAATTGC CGGCGGCCAA GCCGGATATC GCTGGCAGAG TGCGTTCGCG GTGCTGGGTG TCGAGGCGCA GGGCGACTGG GCCAATCTGC GGGGATCGAA TATCAGCCAA CTCGACCCTA CGCTGACGAA CCGAACCATT ACCGATGCCA TCGGCTTATT CACTGGGCAG GCCGGCGCGG CATGGCAGAA CGTACTTTGG TACATCAAAG GGGGCGCGGC CATCACGAAC GACAAGTATG ATGGCCTGAT AACCGGAACG AGCGTCCTGA ACGACAGGGC CTCTGGAACA CGCTGGGGCG GAACGATCGG AACGGGTATT GAAATCGGCT TTGCGCCGAA TTGGTCGGTT GGTATCGAGT ACGATCACCT CTTCATACCC AGCCGGAGCA TTTCGTTCAC CTCGCTCAAC GCGGCTGTTG CGCCGATCGG AATGCAGACC CGCGTCGATA ACGTTCGAGA GGGAGTCGAT ATGGCCACGG TGCGCGTGAA CTATCGATTT GGCGGGCCTA TCGTCGCAAA ATACTGA
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Protein sequence | MIGAAGLLAA GLVASPSFGA DQTERVYYNY SRPKPVFEPN YDWSGFYVGV NVGGGKAHAC WDDAFSFGVL NSPAISEGCH STSGAIAGGQ AGYRWQSAFA VLGVEAQGDW ANLRGSNISQ LDPTLTNRTI TDAIGLFTGQ AGAAWQNVLW YIKGGAAITN DKYDGLITGT SVLNDRASGT RWGGTIGTGI EIGFAPNWSV GIEYDHLFIP SRSISFTSLN AAVAPIGMQT RVDNVREGVD MATVRVNYRF GGPIVAKY
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