| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1540 |
|---|
| Symbol | |
|---|
| ID | 5152930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1620531 |
|---|
| End bp | 1621250 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640556504 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001237662 |
|---|
| Protein GI | 148253077 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0521919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.249483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC CGGACCGCAG GGCGAAGCTC GACCGCGCCC ATGGCGTGCT GTCGATCCGC
CGCCAGTGCC GGCTGCTCGG GCTGTCGCGC TCGAGCGTTT ATCGGACGCC GCTGCCGGCC
AACGATGATG ATCTGGCGCT GATGCGCCGG ATCGATGAGT TGTTCACCGC CCGGCCGTTC
CTGGGCTCGC GGCGGATGGC TTGGCTGATC AGCGAGGATG GCGTCAGGAT CAACCGCAAG
CGGGTGCAGC GGCTGATGCG CAAGATGGGG ATCGAGGCGT TGGGGCCGAA GCCGCGCACC
AGCAAGCCCG CGCCGGGTCA TCGGATTTAT CCCTATCTGC TGCGCGCCAT GACCATCGAC
CGGCCGAACC AGGTCTGGGC CACCGACATC ACCTACATTC CGATGGGGCG CGGCTTCCTC
TACCTGGTGG CCGTGATCGA CTGGGCCAGC CGCGCCGTGC TGAGCTGGCG CCTGTCCAAT
ACGATGGACG TGTCGTTCTG CGTCGACGCC CTGGAGGAGG CGCTGTCGCG GTTCGGCAAG
CCGCAAATCT TCAACACCGA TCAGGGCAGC CAGTTCACCA GCGCGGCCTT CACCAGCGTG
CTGGAAGCCG CCGGCATCCA AATCTCGATG GACGGCCGCG GCCGCTGGAT GGACAACGTG
TTCATCGAGC GGCTGTGGCG CAGCCTCAAG CACGAGGACG TGTATCTCAA ATTCAACTAA
|
|---|
| Protein sequence | MSIPDRRAKL DRAHGVLSIR RQCRLLGLSR SSVYRTPLPA NDDDLALMRR IDELFTARPF
LGSRRMAWLI SEDGVRINRK RVQRLMRKMG IEALGPKPRT SKPAPGHRIY PYLLRAMTID
RPNQVWATDI TYIPMGRGFL YLVAVIDWAS RAVLSWRLSN TMDVSFCVDA LEEALSRFGK
PQIFNTDQGS QFTSAAFTSV LEAAGIQISM DGRGRWMDNV FIERLWRSLK HEDVYLKFN
|
|---|
| |