| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1425 |
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| Symbol | |
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| ID | 5150530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1511341 |
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| End bp | 1514673 |
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| Gene Length | 3333 bp |
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| Protein Length | 1110 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640556402 |
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| Product | RND family mulitdrug efflux protein |
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| Protein accession | YP_001237560 |
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| Protein GI | 148252975 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.400859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGGTC GATCAGCCCG CCGAAACTGT GTCGCTGCAC AAGATCGATG TCATTCCCGA
CCAGAGCGGA TTCCGCGTCA CCGCCGGAAT CGCTCCCGGC GCACGCGTCG TGACCGCCGG
AGTTCACAGC CTCAAGGCAG GACAGCAAAT CCGTATCGCA CAGGATCAAG AGCCATGAAG
TCTTTCAATC TTTCCGACTG GGCGCTCGGG CACCGCTCGC TCGTCTGGTA TTTCATGATC
GCCTTCATGG TGGCCGGCCT GTTTGCCTAT CTTCAGCTCG GACGTCAGGA GGACCCGGAC
TTCACCATCA AGACCATGGT GATCCAGGCG CAGTGGCCAG GCGCCTCGCC CGAGGAGATG
ACGCGCCAGG TCACTGACCG GATCGAGAAG AAGCTCGAAG AACTGGAGTC GCTCGACTAC
ACGAAGAGCG TCACCGTCGC GGGCCAGACC ACCGTGTTCG TCTATCTGCG CGACTCCACC
AAGGCGATCG ACGTGAAGCC GACCTGGGTG CGGATCCGCA ACATGATTGC CGACATCAAG
GGCGATTTCC CGCAAGGGGT GATCGGCCCA GGCTTCAACG ATCGCTTCGG CGACGTGTTC
GGGAACGTTT ATGCCTTCAC GAGCGATGGG CTGAGCCAGC GGCAGCTCCG CGATCAGGTC
GAGGACATCC GCGCCAAGGT GCTGACCGTG CCCGCTGTCG GCAAGGTCGA CATTCTCGGG
GCGCAGGACG AGGTGATCTA TCTTGAGTTC TCGACACGCA AGATCGCCGC CCTCGGCCTC
GACGTGCACG CGATCATGAA TTCGCTCCAA GGCCAGAACG CAGTCGCCCC CTCAGGGTTG
TTCCAGGAAG GGCCCGAGCG GATCAGCGTC CGCGTCAACG GCCAGTTCAC CTCCGAGGCC
AGCCTGAAGG CGGTCAATCT TCGCATCAAT GACCGCTTCT TCCCGCTGAC CGATGTCGCA
ACCATCACGC GGGGCTACCT CGATCCGGCC AGGACGTTGT TCAGGTACAA CGGTCAGCCC
GCGATCGCGC TCGCGATCGG CATGAAGTCC GGCGCAAACC TGCTGCAGTT CGGCAAGGCG
CTGAAAGAAC AGGTGAACAA GGTCATCGCC GACCTGCCGA TCGGCATCGG TGTACATTTG
GTTGCCGACC AGCCCGTTGT GGTCGAGCAT GCCGTGTCGG GCTTCACGGA GGCGCTGTTC
GAAGCCGTGA TCATCGTGCT CGGCATCAGC TTTCTCAGCC TTGGCTTGCG CGCCGGGCTC
GTGGTTGCCA TCGCCATCCC CCTGGTGCTT GCGATCACGT TCGTGGTCAT GGCCTATTCC
GGCATCTCGT TGCAGCGCAT TTCGCTCGGC GCCCTGATCA TTGCGCTCGG CCTCCTGGTC
GACGACGCGA TGATTGCCGT TGAAATGATG GTGGCCCGGC TCGAGATCGG CGACCCCTTG
GAAAAGGCGG CGACCCACGT CTATACGTCG ACCGCGTTCC CGATGCTGAC GGGCACCCTC
GTCACCGTGG CCGGCTTCAT TCCGATCGGC CTGAACAGCA GCAACGCCGG CGAGTTCACC
TTCACGCTCT TCGTGGTGAT CGCGGTTTCG CTGATCGTGT CGTGGATCGT CGCTGTGCTG
TTCACCCCGC TGCTCGGCGT CACTATCCTG CCATCTCAGA TGAAGGGCCA TCACGAGGAC
AAGGGACGCT TGGCGCGGAT GTTCTCGCGC CTGCTGCTCT TCTGCATGCA CCACCGCTGG
AGCACGATCG GTGTAACGGT CGCCGCCTTC CTGCTTGCAG TCGTCGGTCT CCAATTCGTG
CAGCAGCAGT TCTTCCCTTC ATCGGATCGC GCTGAGCTCG TGATTGACTG GAACCTGCCG
CAGAACGCCT CGATCACCGA CACCAACGCG CAGATGGCGC GCTTCGAGCG CGAACAGCTG
CAGGCCAACG ACTCCGTCGA TCACTGGTCG ACCTATGTCG GCACCGGCGC GCCGCGGTTC
GTGCTCTCGT TCGATCTGCA GACCACCAAC ACCTGGTTCG GTCAGCAGGT CATCGTGACC
AAGGGCGGCA TCGCGGCGCG CGATCGTCTC AAGTCTCAGT TCGAGAACTA TTTGAGGACG
ACGTTCCCCG GCACCGACAC CTACGTGAAG TTGCTTGAGG TTGGGCCGCC GGTGGGACGC
CCCGTGCAAT ACCGTCTCAG CGGGCCGGAT ATCGCCAAGG TCCGGGATCT TTCGCAGAAG
CTTGCCGGCA TCGTTCGGAG CAGTCCCGAT CTCGGCAATG TGGTGTTCGA CTGGATGGAG
CCTGCCCGCG TCGTCAAGGT CGATGTCCTG CAGGACAAGG CGCGCCAACT CGGCGTAACC
TCCGAAGATA TCGCAACCAC GCTGAACTCG GTGTTCGAAG GCTCGCCGAT CACCCAGGTG
CGCGACAGCA TCTATCTCGT CAATGTCATG GGACGCGCGA CCGCGCCGGA GCGCGCCTCG
ATTGATACGC TGCGCGATCT GCAGCTGGTC GGGCTCGGCG GTCAATCGGT CCCGCTGGGG
GCGATCGCCA ATTTGCGCTA TGAGCTCGAA CAGCCGACGA TCTGGCGGCG CGCGCGGATT
CCGACGATCA CTCTCAAGGC GGCCGTCGTC GGCAATGTTC AGCCGAAGAC CGTCGTGGAC
CAGCTTGCGC CCAAAGTGGC CGAGTTCACC AAAGGGCTGC CGGCCGGGTA TTCGGTGAGG
ATCGGCGGCT CCGTGGAGGA GAGCGCCAAA AGCCAGGCGC CGATCATCGC CGTCGTTCCG
CTCATGCTGT TCGTCATGGC CACGGTGCTG ATGGTACAGC TGCAGAGCTT CGCCCGCCTG
TTCCTCGTGT TTGCGGTCGC GCCGCTCGCG GTCATCGGCG TGGTCATGGC CATGCTGCCG
AGCGGGGCGC CGCTTGGCTT CGTTGCAATC CTCGGTGTGC TCGCTCTCAT CGGCATCCTG
GTCCGCAACT CCGTGATCCT GATCGTGCAG ATCGAGGATC TGAAGAAGGA GGGGCGGCCG
GCCTGGGAGG CCGTGGTGGA AGCGACCGAG CACCGGATGC GGCCGATTCT GCTGACCGCG
GCCGCTGCGA GTCTCGCGCT CATTCCGATC GCGCGCGAGA TCTTCTGGGG TCCCATGGCG
TACGCCATGA TGGGCGGCAT CATCGTCGGA ACGCTGCTGA CGCTGCTGTT CCTGCCAGCG
CTCTATGTGG CGTGGTTCAA AATTCACCCT GATCACGGCG ATGATCACGT TCGGCCGGAG
ACGGGGACCA AGGCTGCCGC GCACGACCCG TCTGCAGCGC AATGCCTATC CACGCATGAC
CTGCCAGAGC CGGTCCTCGA GCCGCAGGCC TGA
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| Protein sequence | MAGRSARRNC VAAQDRCHSR PERIPRHRRN RSRRTRRDRR SSQPQGRTAN PYRTGSRAMK
SFNLSDWALG HRSLVWYFMI AFMVAGLFAY LQLGRQEDPD FTIKTMVIQA QWPGASPEEM
TRQVTDRIEK KLEELESLDY TKSVTVAGQT TVFVYLRDST KAIDVKPTWV RIRNMIADIK
GDFPQGVIGP GFNDRFGDVF GNVYAFTSDG LSQRQLRDQV EDIRAKVLTV PAVGKVDILG
AQDEVIYLEF STRKIAALGL DVHAIMNSLQ GQNAVAPSGL FQEGPERISV RVNGQFTSEA
SLKAVNLRIN DRFFPLTDVA TITRGYLDPA RTLFRYNGQP AIALAIGMKS GANLLQFGKA
LKEQVNKVIA DLPIGIGVHL VADQPVVVEH AVSGFTEALF EAVIIVLGIS FLSLGLRAGL
VVAIAIPLVL AITFVVMAYS GISLQRISLG ALIIALGLLV DDAMIAVEMM VARLEIGDPL
EKAATHVYTS TAFPMLTGTL VTVAGFIPIG LNSSNAGEFT FTLFVVIAVS LIVSWIVAVL
FTPLLGVTIL PSQMKGHHED KGRLARMFSR LLLFCMHHRW STIGVTVAAF LLAVVGLQFV
QQQFFPSSDR AELVIDWNLP QNASITDTNA QMARFEREQL QANDSVDHWS TYVGTGAPRF
VLSFDLQTTN TWFGQQVIVT KGGIAARDRL KSQFENYLRT TFPGTDTYVK LLEVGPPVGR
PVQYRLSGPD IAKVRDLSQK LAGIVRSSPD LGNVVFDWME PARVVKVDVL QDKARQLGVT
SEDIATTLNS VFEGSPITQV RDSIYLVNVM GRATAPERAS IDTLRDLQLV GLGGQSVPLG
AIANLRYELE QPTIWRRARI PTITLKAAVV GNVQPKTVVD QLAPKVAEFT KGLPAGYSVR
IGGSVEESAK SQAPIIAVVP LMLFVMATVL MVQLQSFARL FLVFAVAPLA VIGVVMAMLP
SGAPLGFVAI LGVLALIGIL VRNSVILIVQ IEDLKKEGRP AWEAVVEATE HRMRPILLTA
AAASLALIPI AREIFWGPMA YAMMGGIIVG TLLTLLFLPA LYVAWFKIHP DHGDDHVRPE
TGTKAAAHDP SAAQCLSTHD LPEPVLEPQA
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