Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1313 |
Symbol | |
ID | 5148841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1399213 |
End bp | 1399842 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640556297 |
Product | putative hydroxylase |
Protein accession | YP_001237456 |
Protein GI | 148252871 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.325019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCCA GCGACTGGGA GGACGGCCGT TCGACGGCTG GCGCCCAGTC GGCGATGGTC AAGCGCAACG AGCAATTGCC GCCCGACAGC GAGGTGGCGC GCAAGCTCGG CCACCGCATC ATTTCGGCGA TGACCGCCAA TCCGCGCTTT CTCGCCGCCG CAATTCCGCA GCATATATTC CCGCCGCTGT TCAACCGTTA CGCGGCCGAC TCAGGCCATC ATTTCGGCAT CCATGTCGAC AATGCCGTCC GTGGCGACAA GCTCACGGGC CTGCGCATTC GCACCGACCT GTCGGTGACG CTGTTTCTCT CCGAGCCGGA AGAGTATGAC GGCGGCGAGC TGGTCATCGA GGATCTCTAC GGCTCGCATG AGGTGAAGCT GCCCGCCGGC GACCTCGTGC TGTATCCGGC CTCCAGCCTG CACATGGTCA CGCCGGTCAC GCGTGGCGTC CGCATCGCCT CGTTCTTCTG GCTGCAGAGC ATGATCCGCG ATCCCCTGGC CCGCAGCATG ATCTTCGATC TCGACACGAC GATCCAGGAT CTGTCGCGCC GCATGGGCCG CGATGATCCG GAGATGGTGA GGCTGACCGG CCTCTATCAC AACCTGATCC GCTATTGGGC CGAGACCTGA
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Protein sequence | MDSSDWEDGR STAGAQSAMV KRNEQLPPDS EVARKLGHRI ISAMTANPRF LAAAIPQHIF PPLFNRYAAD SGHHFGIHVD NAVRGDKLTG LRIRTDLSVT LFLSEPEEYD GGELVIEDLY GSHEVKLPAG DLVLYPASSL HMVTPVTRGV RIASFFWLQS MIRDPLARSM IFDLDTTIQD LSRRMGRDDP EMVRLTGLYH NLIRYWAET
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