| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1142 |
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| Symbol | hbdA |
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| ID | 5153574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1216320 |
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| End bp | 1217198 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640556130 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001237297 |
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| Protein GI | 148252712 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.553979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA TCAACAAGCT CGGTGTGATC GGCGCGGGAC AGATGGGCAA CGGCATCGCG
CATGTTGCCG CCCTGGCCGG GCTCGACGTG GTGCTCAACG ACGTCACCTC CGACCGGTTG
AAATCGGGCA TGGCGACAAT CAATGGCAAC CTGACCCGCC AGGTGGCCAA GAAGGTCATT
TCCGACGAGG CGCGCAGCAA GGCGCTGAAC CATATCTCGC TCGCCGACAG CCTCGACGGC
CTCGCCGATT GCGATCTGGT CATCGAGACC GCGATCGAAA AGGAAGACGT CAAGCGCAAG
ATCTTCCATG ACCTCTGCGC GGTCCTGAAG CCGGAGGCGC TGATCGCCTC CAACACCTCG
TCGATCTCGA TCACGCGGCT TGCCGCCTGC ACCGACCGGC CCGAGCGCTT CATCGGCATT
CATTTCATGA ATCCGGTTCC GCTGATGGAG CTGGTTGAGC TCATCCGCGG CATCGCCACC
GACGACACGA CCTTCGAGGC GGCCAAGGAG TTCGTCGGCC GGCTCGGCAA GCAGATCGCG
GTGTCCGAGG ACTTCCCGGC GTTCATCGTC AACCGTATCC TGCTGCCGAT GATCAACGAG
GCGATCTACA CGCTGTATGA GGGCGTCGGC AATGTCGAGG CGATCGATGC GGCGATGAAG
CTCGGCGCGC ATCATCCGAT GGGCCCGCTG GAGCTGGCCG ATTTCATCGG CCTCGATACC
TGCCTGTCGA TCATGCAGGT GCTGCATGAG GGGCTGGCGG ATTCCAAGTA CCGGCCGTGC
CCGCTGCTGG TGAAATATGT CGAGGCCGGC TGGCTCGGCC GCAAGACGCA GCGCGGCTTC
TACGATTATC GCGGGCCCAA GCCGGTCCCG ACGCGCTGA
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| Protein sequence | MAQINKLGVI GAGQMGNGIA HVAALAGLDV VLNDVTSDRL KSGMATINGN LTRQVAKKVI
SDEARSKALN HISLADSLDG LADCDLVIET AIEKEDVKRK IFHDLCAVLK PEALIASNTS
SISITRLAAC TDRPERFIGI HFMNPVPLME LVELIRGIAT DDTTFEAAKE FVGRLGKQIA
VSEDFPAFIV NRILLPMINE AIYTLYEGVG NVEAIDAAMK LGAHHPMGPL ELADFIGLDT
CLSIMQVLHE GLADSKYRPC PLLVKYVEAG WLGRKTQRGF YDYRGPKPVP TR
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