| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1040 |
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| Symbol | |
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| ID | 5150714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1082364 |
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| End bp | 1084208 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640556033 |
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| Product | hypothetical protein |
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| Protein accession | YP_001237201 |
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| Protein GI | 148252616 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.367897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGTG GAATGACGAA TCCATTTGGC CTCGCTCCAG CTGCAGACGT CGACCACCAG
CGACGTGCTG ATCGCCGTCC CTCTTCAACG GGTTGCGGTA GTCTTGTCCG ATGGGCCGGG
GGCGTGGTGC TGTGTGCGCT GCTGGCGGGG GGACTCGCGG AGCGGGGTGC GGCTCAGGAG
CGCTCGTCGG CCGTCGCGGA TCGACGGGAC GATCTGAGCC CGTGGGGCGC GGCATCCGGC
GCGGAATGGT TCAACGCGTA TCCGCAATTC ATGCCGGTGC TCAGGCGTGC CGGCGTGGGC
TGGCTGCGCG GGTTTTATGA ATGGCAGATC ATCCAGCCGG TCCCCGGACG CTGGAACTTC
ACGCTTCCAG ACGCGCTGGT CCGGACCGCC CGCGCGAATG ATGTTCATCT CGTCGGCGTG
CTCGCTTATC TCGCACCCTG GGCGTCCGCC GATGGCGGGA CACGACAATT CCCGATCAAG
GACATCCGTT TCTGGCGGGA TTATGTGGAC GGCCTGGTCA CAAGGTATCA TGCCGATATC
AAGTATTGGG AGATCTGGAA CGAGTTCAAC GGCAGCTTCG CTCCTGGCGG CACGCCGGCG
CAATATGCCG AACTCGTTCG TGAAGCTGCC ATCGCAGCAA AGAAGATCGA CCCGAACGCC
AAGATCGGCA TGAGCGTCGC CAGCTTCGAC GTCAACTTTC TCGACGCGGC GATCAAGTCC
GGCGCGGCGG GTCATTTCGA TTTCGTCTGC GTTCATCCCT ACGAGTATCT CGCCGAACTC
GCTGCTGGAG GTGAGCCGGC CTTTCTGAGC ATGACCACCT CGCTGCGCAA CATGCTCAAG
GCAAATCATC AGTCCGAGCG GCTTCCATTA TGGATCACCG AGATCGGATC GTCGGCGCCG
ACCAGGCCGG ATCAGGCCGC GGACGACACG CAAGCGGTTC TGCTGACCAA GGCCTATCTT
CTCTCGATCG CGGCCGGCTT CGAGCGCGTG TTCTGGTTCG AGGCGCGCGG ACCGTCCTAC
GGCAAGGGGA CTGACTATGG TCTCATCCGC GAAGACATGT CGCCGCGCCC ATCGCTGACG
TCGCTCAAGA CCTTGACGGA TGTGCTGGGG CAGGAGCCCA AGGCTGCCGG GTGGCTGAAT
CTGGGCGACG GAATTTATGG CTTCCTGTTC GACGGGGCGA AGGGCGCGGT ACTCGCCGCG
TGGACGGCTC CAAGACACGA CACCAGGATC ACCTTCGATA GCGAGGTTCT GATCACGGCG
CCGAGCGGCG CAAGTACAAC GGTCGGGGCA GGGACACCGG TTTCGATTTC ATCGAAGCCG
GTCTTGCTGA CCGGCCTGTC GCCGCGCCTG ATCGAGATGG CTCGGAAGAA CCGCGACGCG
CCGTATCCTT GGGCTGCCAG CGCGGCAGGC AACGTCGCCG TGGCCAGACT GGGCGATGAC
AGTCAAGCGG GCGCGCTGAG CCAGATCCGG CAAGATACGA CGGTGGCCGA GCAGGGCGCG
CGCCGGATGA ATTTCGCGAG GGCCGACAAA GAGGGGCACT ACGCCTATTT TCGCGTCGAT
CCGGCATTCC TGGGGCTCGG CGCGAAGCAG GTGGAGATCA CCGCGGTGGT TCGGCGCGCA
AAGCCGGGTG AGATCGCCGG AATGAGCGTT GACTATGAAT CGACGCGCGG CTACGTCGGC
GCCGATTATC GGACTATACC AGATGGCGAT CAGTGGACCG AGCTGAGTTG GCGCCTGTCT
GATGCGAATT TCGCGGGCGC ATGGGGGTGG AATTTCCGCC TCAATGCGAT CGCATCGCCG
AACGAGCTCC TGATCAGAGA GGTTCGGGTG AAGAAGCTTG ATTAA
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| Protein sequence | MERGMTNPFG LAPAADVDHQ RRADRRPSST GCGSLVRWAG GVVLCALLAG GLAERGAAQE
RSSAVADRRD DLSPWGAASG AEWFNAYPQF MPVLRRAGVG WLRGFYEWQI IQPVPGRWNF
TLPDALVRTA RANDVHLVGV LAYLAPWASA DGGTRQFPIK DIRFWRDYVD GLVTRYHADI
KYWEIWNEFN GSFAPGGTPA QYAELVREAA IAAKKIDPNA KIGMSVASFD VNFLDAAIKS
GAAGHFDFVC VHPYEYLAEL AAGGEPAFLS MTTSLRNMLK ANHQSERLPL WITEIGSSAP
TRPDQAADDT QAVLLTKAYL LSIAAGFERV FWFEARGPSY GKGTDYGLIR EDMSPRPSLT
SLKTLTDVLG QEPKAAGWLN LGDGIYGFLF DGAKGAVLAA WTAPRHDTRI TFDSEVLITA
PSGASTTVGA GTPVSISSKP VLLTGLSPRL IEMARKNRDA PYPWAASAAG NVAVARLGDD
SQAGALSQIR QDTTVAEQGA RRMNFARADK EGHYAYFRVD PAFLGLGAKQ VEITAVVRRA
KPGEIAGMSV DYESTRGYVG ADYRTIPDGD QWTELSWRLS DANFAGAWGW NFRLNAIASP
NELLIREVRV KKLD
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