Gene BBta_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0988 
Symbol 
ID5156303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1023354 
End bp1024433 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID640555982 
Producthypothetical protein 
Protein accessionYP_001237150 
Protein GI148252565 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.152683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.831215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCGGG ATCGGATCGA GTATCTGGAC GGGCTGCGAG GCATCGCGAT CATCGCCGTC 
GTGATGTTTC ATGGCTATGT GGCGTTCCCG GACACGTTGC CATTCGGGGA TCGTTTCGCA
GTCATTCCGC TCCGGTTGGG CTGGCAGGGT GTCCAGCTTT TCTTTCTGAT ATCCGGCTTC
GTCATCCTGA TGAGCCTCGA AGCCTGCAAT GATGTCGCGT CATTCGTCGC TCGGCGGTGG
CTGAGGCTGT TTCCTGCGAT GCTGATCTGC TCGTGTTTCA TCCTCGGCTT GGAGAATATC
ATCGGTGCCG GACCGAATAG CCCGAAGACC TGGATCAATC TCATCCCCGG CCTGACCTTC
CTCAATCCGG CGCTCATCCA CTCGCTGACG GGTCTCAGCA TCGCCTCGAT GGAAGGATCA
TTCTGGTCTC TCTATGTCGA GGTCGTGTTC TACATCGTGT TCGGGCTCGC ATATTTCGCT
GGCGGCCGTG CGTTCGCCGT CGCCCTCATC TTCGCGATAT TCCTCTGCTC GCTGGGTCTG
CGGCTGATCT TCGGTCTGGA TCTGAGCTCG CTGGGCAGCC GCATCGCGGC CGCCACCGAT
TGGATCGGCT TCATTCATTT TGGCTGGTTT TCGAGCGGTG CGCTGTTCTA TCTCTACTGG
TCGCACCGAC GGTGGCCGAT GCTTGCGCTG GCAATCAGCG CGGGATTGAT CTCCGCAGCC
ACGGCGCGCT TCGCGATTCC CGAACGCATG GGCTTGTGCG TCGTGGTGCT GTTGTTTGCG
ACGGCGGTCA CCGTCCCACT GTGGCAGCGA GCTCTGTCCT CGCGCGTTCT CCTGTTCTTC
GGCTTCATCA GCTACCCATT GTACCTGGTT CACTATCCCA TCATCCGGGC ACTGCTCCCG
GCTGTGGCGG TACACGCGCC CGTCCTGCCG TCGCTGCTGT TGCCGGTCGC GCCAATCGCC
TGTGCGGTGG TGACTTCCTG GGCGGTCGCC CAATTCGGCG AGCCGTTGGT GAGGCAGGCG
ATCCGGCGGA TCGCCGGACT GCGGCATGTG CAGAAATCGG CAGGCGCCGT GCAGCCCTGA
 
Protein sequence
MGRDRIEYLD GLRGIAIIAV VMFHGYVAFP DTLPFGDRFA VIPLRLGWQG VQLFFLISGF 
VILMSLEACN DVASFVARRW LRLFPAMLIC SCFILGLENI IGAGPNSPKT WINLIPGLTF
LNPALIHSLT GLSIASMEGS FWSLYVEVVF YIVFGLAYFA GGRAFAVALI FAIFLCSLGL
RLIFGLDLSS LGSRIAAATD WIGFIHFGWF SSGALFYLYW SHRRWPMLAL AISAGLISAA
TARFAIPERM GLCVVVLLFA TAVTVPLWQR ALSSRVLLFF GFISYPLYLV HYPIIRALLP
AVAVHAPVLP SLLLPVAPIA CAVVTSWAVA QFGEPLVRQA IRRIAGLRHV QKSAGAVQP