Gene BBta_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0874 
Symbol 
ID5154810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp906717 
End bp907418 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID640555871 
Productputative hydrolase 
Protein accessionYP_001237041 
Protein GI148252456 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CGCTGCCGCT CGTGCTGGTG CCCGGATTGA TCTCCTCGCC GCGGATCTAC 
GCGCCGGTCA TCCCGGCGCT GTGGCGGCTC GGGCCGGTGA TGGTGGCCAA TCACATCCGC
GATGACAGCA TGGCCGCGAT CGCACGCCGC ATCCTCGTCG AGGCGCCGCC GCGCTTCGCG
CTCGCCGGGC ACTCGATGGG CGGCTACATC GCCTTCGAGA TCATGCGCCA AGCGCCGGAG
CGGGTCGCCA AGCTGGCCCT GATCAACACC CAGGCGCGGC CCGATACGCC GGAGGCCAGT
GCCCGCCGCC GCACCATGAT GACACGCGCC AAGGATGGCG ACTATCACGG CGTCGTCGAC
GAGCTGTTCG CGGGTTTCGT GCATCCGTCG CGCCAGGACG ATCCGCGGCT GCGCCAACTG
GTGCACGACA TGGCCGAGGA GGTCGGCGTC CTCGGCTTCA TCCGGCAGTT GACGGCCATC
ATGTCGCGCC CGGATTCGCG ACCGACCTTG ACCGCGATCC GCTGCCCGAC CCTGGTGCTG
ACCGCCGACA CCGACAACAC CATTCCGAAC AGCCTGTCGA AGGAGATGGC CGACGGCATC
AGCGGCAGCT GGCTGGTCGT GCTCGACAAT TGCGGTCACC TGCCGCAGCC CGAGCAGCCG
GAGGAGACCG CACAGGCGTT GATGGAATGG CTGCGGGGAT GA
 
Protein sequence
MAETLPLVLV PGLISSPRIY APVIPALWRL GPVMVANHIR DDSMAAIARR ILVEAPPRFA 
LAGHSMGGYI AFEIMRQAPE RVAKLALINT QARPDTPEAS ARRRTMMTRA KDGDYHGVVD
ELFAGFVHPS RQDDPRLRQL VHDMAEEVGV LGFIRQLTAI MSRPDSRPTL TAIRCPTLVL
TADTDNTIPN SLSKEMADGI SGSWLVVLDN CGHLPQPEQP EETAQALMEW LRG