Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0866 |
Symbol | |
ID | 5155068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 896587 |
End bp | 897318 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555863 |
Product | putative outer-membrane immunogenic protein precursor |
Protein accession | YP_001237033 |
Protein GI | 148252448 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0649997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA TCCTGTTCGC AACCGTTGCG CTCGCCGCGT TGGCCTCGGC CCAGTCCGCC TTTGCCGCCG ATCTCGGCGC CCGCTCCTAT CCCTACGCCA CCAAGGCACC GGCCTATGTC GCGCCGATCT ACAACTGGAC CGGCTTCTAT CTCGGCGCGC ATCTCGGCGG CGCGTTCTCG AGCGACAACA ATTTCTCGGG CCTCGCCACC GGCAACAATT CGAACGGCCG CTTCCTGGGC GGCGTGCAGG TGGGTGCGGA TTGGCAGTTC GCACCGACCT GGGTGATCGG CGCCGAAGGC CAGTACAGCT GGTTGAGCGG CAATGTCGGC GCGGCCTTCC CTGGCGGCTT CGTCTACACC AACAGCCAGC GCGGCCTCGG CTCGATCACC GGCCGCTTCG GCTACACCTG GGGACCGGGC CTGCTGTATG TGAAGGGCGG CTACGCCTAT TCGGACAATA ACGAGAAGGT GACGCTCGCC GGCAATCAGA TCGGCTTCGC CACCAATGGC GACCACCGCA ACGGCTGGAC CGTCGGCGCC GGCATCGAAT ACATGTTCGC ACCGAGCTGG TCCGCCAAGG CCGAGTACCA GTACTACAAT TTCGGCAGCG CCACCTTCAC GGCGCCCGCC GGACTGGTGC CGACCGGCAG CTTCACCACC GACGACCACA CCTTCAAGGC CGGCGTGAAC TATCGCTTCA ACTGGGGTGC TCCAGTCGCC AGCCGCTACT GA
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Protein sequence | MKKILFATVA LAALASAQSA FAADLGARSY PYATKAPAYV APIYNWTGFY LGAHLGGAFS SDNNFSGLAT GNNSNGRFLG GVQVGADWQF APTWVIGAEG QYSWLSGNVG AAFPGGFVYT NSQRGLGSIT GRFGYTWGPG LLYVKGGYAY SDNNEKVTLA GNQIGFATNG DHRNGWTVGA GIEYMFAPSW SAKAEYQYYN FGSATFTAPA GLVPTGSFTT DDHTFKAGVN YRFNWGAPVA SRY
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