Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0812 |
Symbol | |
ID | 5153356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 835996 |
End bp | 839478 |
Gene Length | 3483 bp |
Protein Length | 1160 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640555810 |
Product | hypothetical protein |
Protein accession | YP_001236980 |
Protein GI | 148252395 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.940934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.237847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC GCGTACCGTG GAGTAATGAA GGCATCGACC CAACCGTCCG CGAGAGGGCC GAGGCCGCGG CGCAGCGCGC CGGGATGACG CTGAACGACT GGATCAACTC CACGCTCGGA GCATCTGCTC CGCCCGATTT CCGCAGCAGC TATCCGCCGC GCGCCACGCC GCCGGCGAAT CGCGATGCCC GTGAAGTCAC CGACATTCAT CAGCGGCTCG ACTCCATCGC CCGCCAGATC GAGCAGATGT CGCGCCCGGT CGCGCGCAAA GACACGCCCC GCGACGAGCA GGGCGTCGCC CGTCAGCTCA ACGAGGCCAT TTCCCGGCTC GATGCCCGCC TGTCGCAGAT CTCGACGCCG CTGCGCAAAT CGGCCACCGA GGAGCGCTAC CGCGGACCGG ACGGCGTGGA GCGCGCGGCG TCGCAGCTCT ATCGCCCGGC TCAACCATTG AACCCCGGCG CGTTCGACAT CGCCGTCGCC GAGATCAGCG CCCGGCAGAG CGAGCTCGAC AATGCGCGCG CCCTGCCGTC GCATCAGGCG CCGCCGACCG TTCCCGCGAT GACTCCCGCC GCGGCACCGT TGATGACGCC ACCGCCGGCC GCCGCGCCCG GCCCGGATTT TTCGCAGCTC GAACGCCACC TCCTCAAGAT CACGAGCCAG ATCGAGTCGC TGCAGCGGCC TGAGGACGGC ATCGAACAGT CGATCGCCGG CTTCCGCAAC GACCTCGCCG AGATCCGCCA CGCCATCACC GAGGCAATGC CGCGGCGCGC GATCGAATCG CTCGAGAACG AGATCCGCTC GCTGTCGCGC CGCATCGACG AGAACCGCCA GAGCGGCGTC GACGGCCATG CGCTGGCCGG CATCGAACGC GCGCTGACGG ACATTCGCGA GGTCGTGGGC TCGCTGAAGC CGGCCGAGCA GCTCGCGGTC TATGACGAGG CGATTCGCAA TCTCGGGACC AAGCTCGATC TGATCCTGCG CGCCAATGAC GACCCCGGCA CGGTGCAGCA GCTCGAAAGC GCGATCACTG CCTTGCGCGC GATCGTGGCC AACGTCGCCT CCAACGATGC GCTGGAGCGG CTCTCGGACG ATCTGCGGCA ATTGTCCTCG AAGGTCGACC AGGTCACGCA GGCCCGCGAC ACGCACGACT CCTTCCACGA TTCGTTTGCG GCGCTCGAGC AGCGCATCGC GGCACTGACC TCGACCTTGG AGAATCGCGA GCGGCCCGCC GCGGCACCTG ACAATTCCGC CCAGATCGAG GACGCGCTGC GCGGCCTGTC GGACCGCATC GACCGGCTGC AGGTCGGCAA TGACGGCTCG TCGGCGATCA CCCATCTCGA GCAGCGGATC AGCTTCCTGC TCGAGCGGCT CGAGGCGGCC AACGATCCGC GCGGCGGCAA TATGACCCGC GTCGAGGACG GGCTGCAGGA CATCCTGCGC TATCTGGAGC GTCAGCAGGC GACCTTTGCC GCACTCGCCG AGAGCAGGTC GCAACGCGAG ACGTCGCAGG ACGGCGGCCT GATCGACGTC GTCAAGCGCG AGCTGTCGGA TATCCGCTTC AGCCAGACCG AAACCGATCG CAACACCCAG GACTCGCTGG AAGCGGTCCA CAATACGCTC GGCCACGTCG TCGACCGGCT CGCCATGATC GAGGGTGATC TGCGCAATGT GCGCGCGACC TCGAGCCAAC CCGCCGCCAT TCTGGCTCCC CCGATCGAGG CGCCGATGCC GGCGGCGCGC GCGCCTGCGC CGCAGACCTA TGCCGAGCCG GCCCGGCCCG AACCGGCTTA TCGGCCCGAA CTGCCGAACC CGGCGACCGA GCAGCCTTCG GCGCAGATCG TGAGCCCGGC TGCCAACCAA GCGGCCTTCG CGGCAGCGCC GCGCGACTTC CATGCGGCGG CCGCCCCGGC CGCGCCTCCA CCGCCGATCC CGCCCAAGGC GATCGCCGAG ATCCTGGAGC CCCACGCGGC CCAGGCGGCG CGCCCGACCC CCATCGTCCC CGAATTGCCG CCGGATCATC CGCTGGAGCC CGGTACGCGT CCGCTCGGCC GCACCGCCTC CCCTGCGGAA CGGATCGCGG CCTCCGAGGA TGCGCTCAGC GAGCTTCCGG CCGGCAAGCG CGAACCGGTT TCGACCTCGA GCTTCATCGC GGCGGCCCGC CGGGCCGCCC AGGCGGCAGC CGCAGCCCAG CCGGTCGACG CGAAGAAGGC GGACAAGGCC AAGAAGGACA AGCCGAAGGC CAAGGAGCCC CCCAAGGAAG CCGTCAAGGA CCTTCCAAAG GAAGCTGCAA AGGCCAAGAT CAAGGACAAG CCGACGGTCG CCCTCACGGC TGAAGGCGAC GAGGAGGTCT CGACGATCGG ATCGAAGATC CGCTCGCTGC TGGTCGGCGC CAGCGTCGTC GTGATCGTGC TCGGCACCTT CAAATTCGCG ATGTCGCTGC TCGACTCCGG CAGCACGCCA CCGCCGATCA CCCCGATGGA GAGCCAAGGT GAGGCGCCGC GCGCACAGAT GCCGTCGGCG ACACCGAGCC TCTCGCCGCG GCCGGCGACA CCGGATCAGA GCGTCCCGTC ATTGACCTCG CCGACGCCGA TGGACCGTCA GTCCTACAAC AGGTCGATGC CGACCGAGGC CGAGACCATC GCGATGCTCG CGATCCCGCA GGATACCGAC AAGCAGGCAG CCGCTGCCGC CGCGCCCGAC GTCACCGGCA CGGTGCCGAC CGCGGCCAAC GGCCAGAAGC TCGGCCTCGT GCAGGTGCCG ACGTCCGAAA AGCTGCCCGA CGGCATCGGC GGGCTGGCGC TGCGCAATTC CGCCCTGAAG GGAGACCCGA CGGCGGCCTA CGAGGTCGGC GTGCGCTTCG CCGAAGGCAA GGGCATCGCC GCGAACTACG AGGAAGCGGC GAAATGGTAT GACCGCGCCG CGCAGGCCGG ACTCATTCCG GCGGTGTTTC GTCTCGGCAC CTTCTACGAG AAGGGCCTCG GCGTGAAGAA GGACGCCGAC ATCGCGCGCC GCTATTATGT CGTCGCCGCC GAACGCGGCA ACGCCAAGGC GATGCATAAT CTCGCGGTGC TCGACGCCGA TGGCGGCGGC AAGGGCGCGA ACTACAAGAG CGCGTCGCAG TGGTTCCGCA AGGCGGCCGA GCGCGGTGTG GCTGACAGCC AGTACAATCT CGGCATTCTC TATGCCCGCG GCATCGGGGT CGAACAGAAC CTCGCTGAAT CCTACAAATG GTTCAGCCTC GCGGCGGCAC AGGGCGATGC CGATGCCGGC CGCAAGCGCG ACGATGTCGC CAAGCGGCTC GATGCCCAGT CGCTCGCCGC CGCGAAGCTC GCGATCCAGA CCTTCACCGT CGAGCCGCAG CCGGACGACG CAGTCAATGT GCCGGCGCCC GCCGGTGGCT GGGACGGCGC CCAGACCATC GCCAGGGCGG CAGCCGCCAA GGCCGCCATG GCGAAGCGGA CCGCAGCAGC GGCGCCACGC TGA
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Protein sequence | MNSRVPWSNE GIDPTVRERA EAAAQRAGMT LNDWINSTLG ASAPPDFRSS YPPRATPPAN RDAREVTDIH QRLDSIARQI EQMSRPVARK DTPRDEQGVA RQLNEAISRL DARLSQISTP LRKSATEERY RGPDGVERAA SQLYRPAQPL NPGAFDIAVA EISARQSELD NARALPSHQA PPTVPAMTPA AAPLMTPPPA AAPGPDFSQL ERHLLKITSQ IESLQRPEDG IEQSIAGFRN DLAEIRHAIT EAMPRRAIES LENEIRSLSR RIDENRQSGV DGHALAGIER ALTDIREVVG SLKPAEQLAV YDEAIRNLGT KLDLILRAND DPGTVQQLES AITALRAIVA NVASNDALER LSDDLRQLSS KVDQVTQARD THDSFHDSFA ALEQRIAALT STLENRERPA AAPDNSAQIE DALRGLSDRI DRLQVGNDGS SAITHLEQRI SFLLERLEAA NDPRGGNMTR VEDGLQDILR YLERQQATFA ALAESRSQRE TSQDGGLIDV VKRELSDIRF SQTETDRNTQ DSLEAVHNTL GHVVDRLAMI EGDLRNVRAT SSQPAAILAP PIEAPMPAAR APAPQTYAEP ARPEPAYRPE LPNPATEQPS AQIVSPAANQ AAFAAAPRDF HAAAAPAAPP PPIPPKAIAE ILEPHAAQAA RPTPIVPELP PDHPLEPGTR PLGRTASPAE RIAASEDALS ELPAGKREPV STSSFIAAAR RAAQAAAAAQ PVDAKKADKA KKDKPKAKEP PKEAVKDLPK EAAKAKIKDK PTVALTAEGD EEVSTIGSKI RSLLVGASVV VIVLGTFKFA MSLLDSGSTP PPITPMESQG EAPRAQMPSA TPSLSPRPAT PDQSVPSLTS PTPMDRQSYN RSMPTEAETI AMLAIPQDTD KQAAAAAAPD VTGTVPTAAN GQKLGLVQVP TSEKLPDGIG GLALRNSALK GDPTAAYEVG VRFAEGKGIA ANYEEAAKWY DRAAQAGLIP AVFRLGTFYE KGLGVKKDAD IARRYYVVAA ERGNAKAMHN LAVLDADGGG KGANYKSASQ WFRKAAERGV ADSQYNLGIL YARGIGVEQN LAESYKWFSL AAAQGDADAG RKRDDVAKRL DAQSLAAAKL AIQTFTVEPQ PDDAVNVPAP AGGWDGAQTI ARAAAAKAAM AKRTAAAAPR
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