Gene BBta_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0810 
Symbol 
ID5154406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp834239 
End bp834859 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID640555808 
Producttranscriptional regulator 
Protein accessionYP_001236978 
Protein GI148252393 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.490663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.19914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGC CCGCGCTCAC ACCCGACGAA CTCGACAGCA CAAGGCGCCG CATCCTGGCG 
GAAACCGCGG CGATCGTTGC CAGCGAGGGC TATGCGGCGC TGTCGATGCG CCGCATCGCC
AGCGCGATCG GACTGACGGC GGGAGCCCTC TATCGCTATT TTCCGACCAA GCAGCACGTG
CTGATGGCCC TCTGGTCGGA TGCCATTGCC GAGCTCGACG CCCGGATCGT CGCCATGGAC
GCCGCTCATG ACCACGATGT CGATGCGATT GCCGGCATAC TGAGGGCCTA TGCGGAATTC
GCCCTCGCCG ATCCCGCCCG CTTCAGGCTG ATGTTCCTCG AAAACGATCT CGGGCAGTTC
GACGAACTCG CGCGCGAGCA GGACTTCTTC GCCTCCTATC TGCGGCTGCA GGCGCGCGTC
GAGCAGGCGA TCCGCGCCGG AGCGTTGCAG GCGATGCCGG CAGAGGCTGC GACGCAACTG
CTGTGGGGCA GCGTCCACGG CATCGTCACG CTCGGGGTCA CCGTCAACCA GATCGATTTC
GGCGACCTGC TTCGGCTGGC CGCTACCGCC GCGGACACGA TGCTCCGCGG CTTGTCTGTC
CCTCCCTCAA CGACGAGGTA A
 
Protein sequence
MARPALTPDE LDSTRRRILA ETAAIVASEG YAALSMRRIA SAIGLTAGAL YRYFPTKQHV 
LMALWSDAIA ELDARIVAMD AAHDHDVDAI AGILRAYAEF ALADPARFRL MFLENDLGQF
DELAREQDFF ASYLRLQARV EQAIRAGALQ AMPAEAATQL LWGSVHGIVT LGVTVNQIDF
GDLLRLAATA ADTMLRGLSV PPSTTR