| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0751 |
|---|
| Symbol | |
|---|
| ID | 5155750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 772488 |
|---|
| End bp | 773297 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640555751 |
|---|
| Product | putative short-chain dehydrogenase/reductase (SDR) |
|---|
| Protein accession | YP_001236922 |
|---|
| Protein GI | 148252337 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGA ACCTGTTCTC ACTCGATGGG CGCATCGCGC TCGTCACCGG CGGCTCGCGC
GGCATCGGCA AGATGATCGC AGCCGGCCTG CTCGCGCAGG GCGCTGCGCG GGTCTACATC
ACCGCGCGCA AGGCCGGCCC GTGCGAGGAG ACGGCCAAGC AGCTGACGGC CGAATATGGC
GGCGAATGCA TCGCGCTTCC GATCGACATC TCGACGATGG CCGGCATCGA TAGGCTGGCG
GCGGAGATCA AGCAGCGCGA GCCGAAGCTC GACATCCTGG TCAACAATGC GGGCGCGGCC
TGGGGCGCGG ATTTCGACGA ATTCCCGGAG AGCGGCTGGG ACAAGGTGAT GAACCTCAAC
GTCAAGACGC CGTTCTTCCT GACCAAGGCG CTGGCAGCGC CCTTGCGTGC AGCCGCGAGC
GCGGAGCGTC CGGCGAAGGT CATCAACATC GCCTCGATCG ACGGCATCTT CGTCAATCCG
CTGGAGACCT ATTCCTACGC GGCCAGCAAG TCGGGGCTGA TCCATCTGAC GCGGCGCATG
GCGGCGAAGC TGATCCACGA CCACATCGTG GTGACCGCGA TCGCGCCAGG ACCGTTCAAG
TCGGACATGA ACAAGGCCGC GCGCGACCAT GAGGACGAGG TCGCCAAGCG CGTTCCGGCG
GGGCGCATCG GCACCGACGA GGACATGGCC GGCACCGCGA TCTTCCTCGC TTCGCGCGCG
GGCGACTACG TGGTGGGGAA TACGATCGCA GTCGACGGCG GCATCGTCTA CGCGAACCCG
GGCATTCCGG GTGCGGGCTG GGATAGTTGA
|
|---|
| Protein sequence | MLKNLFSLDG RIALVTGGSR GIGKMIAAGL LAQGAARVYI TARKAGPCEE TAKQLTAEYG
GECIALPIDI STMAGIDRLA AEIKQREPKL DILVNNAGAA WGADFDEFPE SGWDKVMNLN
VKTPFFLTKA LAAPLRAAAS AERPAKVINI ASIDGIFVNP LETYSYAASK SGLIHLTRRM
AAKLIHDHIV VTAIAPGPFK SDMNKAARDH EDEVAKRVPA GRIGTDEDMA GTAIFLASRA
GDYVVGNTIA VDGGIVYANP GIPGAGWDS
|
|---|
| |