Gene BBta_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0626 
Symbol 
ID5149230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp628409 
End bp629644 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content65% 
IMG OID640555630 
Producthypothetical protein 
Protein accessionYP_001236802 
Protein GI148252217 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG TCGATCAGTC GCTTCCGCAA AAGGCATCGT GGCAGATCGG GTATCGCTGG 
ATCGTGCTCG TCGTTGCGTC GATGGCGCAG GCAACCGCCT CGGTCGTGTC GCAGGGATCC
TATGTGATGG TGCCGTTCTG GCGGGAGGCG TTCGTCCTGA GCGAGGCGCA GACCGGGGCG
CTGCTTGCTG CCATGAATGG AGGGCAGATC CTCTCCATGA TCCCGCTGGG CACGGCGATC
GATCGTTATG GCGAGCGCGT GGTCGTCGGC GTCACCATGC TGGCGATGAG TGCCGTATCA
TTCGCGATCG GACATTTTGT CGACAGCTAT GTCGGGCTTC TGTTTGGTCT GGTGGCGCTC
GGCGCGTTCT ACGCATCGGT GCAGCCTGGC GGCACGCGCG CGATCCTCAA ATGGTTTCCC
CCCAGCGAGC GCGGCTTCGC CATGGGCATC CGCCAATCCG GCCTGCCGCT GGGAACGGCG
GCGGCGGCAT TGCTGCTTCC GGCGCTTGCA ATCAGTGCCG GCTGGCGCAA CGTCACCCTC
GTGCAGGCCG GCATCGGCAT GGCCGGTGCG TTGCTTTTCC TCGCCCTGCA CCGCGATCGG
GATCTGCCGC CCCAAGGTGG CGCAAAGGGG CGCATTCCGT TCTTCGCTCT CGTCAAGATC
ATCAACGAGA CACCTGGATT CAAGGCGACA TTGGCCGCCG GCGCCATCAT GGCGGGATTC
CAGTACACCT TCTCGACCTT CGTCGTCGTG TACCTCGCGT CGGCCGTCAA GGCGCAGCTC
CTGACGGCTT CGTCGTTATT CGCGCTGACT CAGATCGTAG GCGTAGTGGG ACGCGTATCG
CTGGTCTCGA TCAGCGACCG GCTCTGGCCC GGGCGGCGCA CCCGAACGCT GCGCTGGCTG
ATGATCTCCT GCGCGGGTCT CACGCTGTCC CTGTTGATGC TGCCCGCTGG GGCCTCGACC
GGCCTGCTGG TGCCGCTATT GGCCGCCTTC GGTCTCGCCG GCATCGGCTG GTATCCGGTC
TGGCTGCTCC AGGTGGGCGA AAATGCACCG AAAGAGGCGG TGGCTGCGAC CGTGAGTTTC
GCCATGACGC TCAACCTCGT CGTGATCAGC CTCTCGCCGC CGCTCTTTGG ATTGATTGCC
GATCTCGGCG GGTATGTCGC TGCTTGGATC GCGGTTGCGG TCGGCGTGAC GATCGGCGCG
CTCGCGCTGC GTGAGCGTCG GGTCCCCGTC GCATGA
 
Protein sequence
MSEVDQSLPQ KASWQIGYRW IVLVVASMAQ ATASVVSQGS YVMVPFWREA FVLSEAQTGA 
LLAAMNGGQI LSMIPLGTAI DRYGERVVVG VTMLAMSAVS FAIGHFVDSY VGLLFGLVAL
GAFYASVQPG GTRAILKWFP PSERGFAMGI RQSGLPLGTA AAALLLPALA ISAGWRNVTL
VQAGIGMAGA LLFLALHRDR DLPPQGGAKG RIPFFALVKI INETPGFKAT LAAGAIMAGF
QYTFSTFVVV YLASAVKAQL LTASSLFALT QIVGVVGRVS LVSISDRLWP GRRTRTLRWL
MISCAGLTLS LLMLPAGAST GLLVPLLAAF GLAGIGWYPV WLLQVGENAP KEAVAATVSF
AMTLNLVVIS LSPPLFGLIA DLGGYVAAWI AVAVGVTIGA LALRERRVPV A