| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0618 |
|---|
| Symbol | |
|---|
| ID | 5150576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 620796 |
|---|
| End bp | 621887 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640555624 |
|---|
| Product | putative branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_001236796 |
|---|
| Protein GI | 148252211 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGCAAC AAGATGCCCG CTCGCCCCTT GCGCATCTCG GCGGTGCTCT GGGGTTCGGC
AAATATATGA CCAACGCGAT GGTGCTCTGT CGGTACAGCG ACGGGACTGG CTGGGAAAAG
CCGAGCCTGG TCCCCTATGG GACGCTCGCA TTCGACCCAT GCGCGCTGGT GCTGCATTAT
GGCCAGGCGA TCTATGAGGG GATGAAGGCA TATCGATCCC CCGACGCCTC GATCGCGCTG
TTTCGACCGG ATCGCAACGC GGCGCGCTTC CGCGCTTCTG CACGGCGCAT GGAGATGGCC
GAGATGCCGG AGGGCTTGTT CATCGAGGCA GTGAGCACCC TGGTGGACGC GCAACGCGAT
TGGGTGCCGG CTGGCGCGGA ATCGTCGCTG TATCTGCGAC CGGTCATGGT CGCCGACGAA
GCGGCATTCG GTGTGCGCAG ATCGACGACT TACCTGTTCT TCATTGTCGC GACGCCCGTG
GACGCGCTCT ACCGCGACGG CATGGCGCCG TTCAGATTGA TGGTGAGCGA GGACTTTGCC
CGCGCGGCGC CCGGCGGCGG AGGAGATGCG AAGACATCGG GAAACTACGG CAGAACATTG
ATCGCGCTCG AAGCAGCGCG AAGGAGCGGC TTCAACAACG TTCTCTGGCT GGATCCGGTT
GAACGTGAGT TCATCGAGGA GGCGGGGATC ACGAATGTCT TCGTTCGCCG CGGGCGCGAC
CTGCTCACGC CGCCGCTCAA CGGTCGCATT CTGCCGGGCG TGATGAGAGA GACGATCCTG
CAAGTGGCCC GAGACTGGGG CCTGAGCGCG ATCGAACGGG AAATTTCGGT TACGGAGCTG
CTGAGCGGGA TCGATGCAGG TGATGTTGAT GAGGTGTTCC TGAGTGGCAC AGCCGTTCAC
GTCGCTCCGG TCGGCGTCAT CGCCCGGCGG GGGCGCGAAC ATCGATTGGC GGCCGCCGGG
GAGGCGCAGA GCCTGGCGAA GCGGCTGTCG CAGGCCATAT CCGAAATCCA GCGAGGGCTG
GTCGCGGATA CGCGAGGTTG GATGCGCCGC GTCGCCGCGC CGTCAGACTG TCTGGTCCTA
AGCGAGCCTT GA
|
|---|
| Protein sequence | MMQQDARSPL AHLGGALGFG KYMTNAMVLC RYSDGTGWEK PSLVPYGTLA FDPCALVLHY
GQAIYEGMKA YRSPDASIAL FRPDRNAARF RASARRMEMA EMPEGLFIEA VSTLVDAQRD
WVPAGAESSL YLRPVMVADE AAFGVRRSTT YLFFIVATPV DALYRDGMAP FRLMVSEDFA
RAAPGGGGDA KTSGNYGRTL IALEAARRSG FNNVLWLDPV EREFIEEAGI TNVFVRRGRD
LLTPPLNGRI LPGVMRETIL QVARDWGLSA IEREISVTEL LSGIDAGDVD EVFLSGTAVH
VAPVGVIARR GREHRLAAAG EAQSLAKRLS QAISEIQRGL VADTRGWMRR VAAPSDCLVL
SEP
|
|---|
| |