Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0577 |
Symbol | otsB |
ID | 5156059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 584707 |
End bp | 585540 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555588 |
Product | trehalose-phosphatase (trehalose 6-phosphate phosphatase) (TPP) |
Protein accession | YP_001236761 |
Protein GI | 148252176 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG TTTCGAAGCT GATTGCAACG CAACCACCCG CGGCCGCCAG CGCGCCCCCC GAGATCGTGC CCGCGCCCGC CAGCCTGGTG CCGCATCTCG GCGAGGTGGC GATCCTTCTT GATATCGACG GCACGCTGCT CGATCTCGCG CCGACGCCAC GCGAGGTATG GGTGCCGCCG GGGCTCGCCG AGACGCTGAA TAGCTTGCTG CAACGAACCG CCGGAGCGCT GGCGCTGGTC AGCGGCCGCT CGCTCAACGA CATCGACCTG ATCTTCGCGC CGGAGATCTA TCCCGCCGTC GGTGGCCACG GTGCGGAGAT GCGGCTCGGC AGCGGCAACG AGGCCGACGC CGTTCAGGCG CCGCCGATGG ACAAGGAGCT CAAGCGCAGG CTGGCGGCGA TTGCCAAGCT CAGCCCCGGC ATCCTGCTCG AGGACAAGGG CTACTCGCTG GCCCTGCATT ATCGTCTCGC GCCGCAGGCC GAGGCGGCAA TCTATGAGGA GGTGTCGCGC ATTCGCGCGG AGCTGCCGGG CGCGCCGATC GAGGTATTAC CGGGCAAATG CGTGTGCGAG ATCAAGCACG CCGGCTTCAC CAAGGCGACC GGTGTGCGCG AGCTGATGCG CCGTGCGCCG TTCGAGGGGC GCAAGCCGTT CTTCATCGGC GATGACGTGA CCGACGAATC GGTGTTCGCA ATCATGCCTG ATTTCGCCGG CCTGTCGTTC TCGGTCGGCC GGCGTGCCCT TGGTGTCGAT GGACATTTCG ATTCGCCGGA CGATGTGCGC GCGTTTCTCG CACGACTCGC GCAACGCGAA GGTCAGTCCG CGGCATCGCG CTGA
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Protein sequence | MSDVSKLIAT QPPAAASAPP EIVPAPASLV PHLGEVAILL DIDGTLLDLA PTPREVWVPP GLAETLNSLL QRTAGALALV SGRSLNDIDL IFAPEIYPAV GGHGAEMRLG SGNEADAVQA PPMDKELKRR LAAIAKLSPG ILLEDKGYSL ALHYRLAPQA EAAIYEEVSR IRAELPGAPI EVLPGKCVCE IKHAGFTKAT GVRELMRRAP FEGRKPFFIG DDVTDESVFA IMPDFAGLSF SVGRRALGVD GHFDSPDDVR AFLARLAQRE GQSAASR
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