| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0572 |
|---|
| Symbol | |
|---|
| ID | 5149417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 576694 |
|---|
| End bp | 577494 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640555583 |
|---|
| Product | putative carbon monoxide dehydrogenase medium subunit, coxM-like protein |
|---|
| Protein accession | YP_001236756 |
|---|
| Protein GI | 148252171 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.583435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAGA CGACTTATCA TCGTGCCTCC TCGGTCGACG AGGCGGCGGC GCTGTTCGCC
AAGGGCAGCG AAGCCAAGTT CCTCGCCGGC GGCCACACTC TGCTTCCGGT CATGAAGCAG
CGTCTCGCCT CGCCGTCCGA CGTCATCGAC ATCGGCAAGA TCAAGGACCT GATCGGCGTG
CAACTGTCCG GCGACACGCT CGTGATCAAG GCCGCGACCA CCTACTACGA CATCATGACC
AATGCCGACG TGCAGAAGGC GATCCCCGCG ATCTCCTATC TCACCTCGGT GCTCGGCGAT
CCCGCAGTGC GTCACCGTGG CACCATCGGC GGCTCCATCG CCAACAACGA CCCGGCGGCG
GACTTCCCGG CGGCGCTGAT CTCGCTCGGC GCAACCGTGA AGACCAACAA GCGCGCGATC
ACGGCGGATG ATTTCTTCAA GGGCCTGTTC ACGACGGCGC TTGAGGATGG CGAGATCATC
ACCGAGGTGG CGTTCCCGGT GCCGGAAAAG GCCGGCTACG CGAAGATGCG CCACCCGGCG
TCGCGCTTCG CGCTGACCGG CGTGTTCGTC ACCAAGACCA AGGGCGGCGA TGTCCGCGTC
GCCGCCACCG GCGCGTCGCA GAGCGGCGTG ATGCGGGTGC CGGCGATCGA GGCGGCACTG
AAGTCGAACT GGTCGGCATC GGCGATCGAC GGCGTCACCG TGTCGGCATC AGGCCTGCTC
AGCGACATCC ATGGTTCGTC CGACTATCGC GCCAATCTGG TGAAGGTGAT GGCGCAGCGC
GCGGTGCAAG CGGCGGGCTG A
|
|---|
| Protein sequence | MYQTTYHRAS SVDEAAALFA KGSEAKFLAG GHTLLPVMKQ RLASPSDVID IGKIKDLIGV
QLSGDTLVIK AATTYYDIMT NADVQKAIPA ISYLTSVLGD PAVRHRGTIG GSIANNDPAA
DFPAALISLG ATVKTNKRAI TADDFFKGLF TTALEDGEII TEVAFPVPEK AGYAKMRHPA
SRFALTGVFV TKTKGGDVRV AATGASQSGV MRVPAIEAAL KSNWSASAID GVTVSASGLL
SDIHGSSDYR ANLVKVMAQR AVQAAG
|
|---|
| |